Showing : HtqPCR • reset
3
votes
4
replies
4.1k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 3.4 years ago by ▴ 380 • written 4.2 years ago by ▴ 680
0
votes
4
replies
2.8k
views
HTqPCR to analyze Fluidigm 96.96 Dynamic Array data
qPCR HTqPCR qPCR HTqPCR
updated 14.8 years ago by ★ 2.0k • written 14.8 years ago by ▴ 30
0
votes
6
replies
2.5k
views
HTqPCR
qPCR GO GLAD HTqPCR qPCR GO GLAD HTqPCR
updated 12.8 years ago by ★ 2.0k • written 12.8 years ago by ▴ 40
0
votes
7
replies
2.5k
views
readCtData() in HTqPCR with matrix of multiple samples
HTqPCR HTqPCR
updated 14.0 years ago by ★ 2.0k • written 14.0 years ago by ▴ 350
3
votes
7
replies
2.4k
views
Subsetting qPCRset loses sample names, possibly due to change of assayDataElementReplace
HTqPCR
8.2 years ago henrik.seidel ▴ 40
0
votes
0
replies
2.3k
views
reading qRT-PCR data
ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR
10.9 years ago Guest User ★ 13k
0
votes
2
replies
2.2k
views
HTqPCR problem with creation of qPCRset
qPCR HTqPCR qPCR HTqPCR
updated 12.1 years ago by 68k • written 12.1 years ago by ▴ 20
0
votes
2
replies
2.2k
views
HTqPCR - how to read data file with multiple samples
HTqPCR HTqPCR
updated 15.2 years ago by ★ 2.0k • written 15.2 years ago by ▴ 50
1
vote
0
replies
2.2k
views
HTqPCR readCtData 12 samples x 63 genes - error: row names supplied are of the wrong length
HTqPCR readCtData Heidi Dvinge
8.9 years ago virginia.claudio ▴ 10
0
votes
2
replies
2.1k
views
reading in data in ReadqPCR
qPCR Annotation HTqPCR qPCR Annotation HTqPCR
12.1 years ago Guest User ★ 13k
1
vote
7
replies
2.0k
views
limmaCTData Error requires ndups=2 even when there are no duplicate genes (should be ndups=1)
limma ndups htqpcr software error
updated 9.6 years ago by 52k • written 9.6 years ago by • 0
0
votes
0
replies
2.0k
views
HTqPCR R Bioconductor question (problem reading SDS files for qPCR) (Alexander Williams)
qPCR HTqPCR qPCR HTqPCR
14.2 years ago Alexander Williams ▴ 20
0
votes
1
reply
2.0k
views
Problems creating a qPCRset object in "HTqPCR"
HTqPCR HTqPCR
13.8 years ago Peter Davidsen ▴ 210
0
votes
1
reply
1.9k
views
Problem with function limmaCtData in HTqPCR package: "leading minor of order 2 is not positive definite"
HTqPCR HTqPCR
updated 14.7 years ago by ★ 2.0k • written 14.7 years ago by ▴ 10
0
votes
5
replies
1.9k
views
HTqPCR: new qPCRset objects problem
HTqPCR HTqPCR
updated 14.1 years ago by ★ 2.0k • written 14.1 years ago by ▴ 30
0
votes
8
replies
1.8k
views
HTqPCR problems
HTqPCR HTqPCR
updated 12.8 years ago by ★ 2.0k • written 12.8 years ago by ▴ 340
0
votes
1
reply
1.8k
views
Using HTqPCR for Fluidigm BioMark input data (48.48 array)
Clustering HTqPCR Clustering HTqPCR
updated 12.4 years ago by ▴ 60 • written 12.4 years ago by ▴ 10
0
votes
5
replies
1.8k
views
Reading in mutiple files using readCtData
HTqPCR HTqPCR
updated 11.1 years ago by 68k • written 11.1 years ago by ▴ 50
0
votes
0
replies
1.8k
views
HTqPCR
qPCR limma ddCt HTqPCR qPCR limma ddCt HTqPCR
12.5 years ago Heidi Dvinge ★ 2.0k
0
votes
0
replies
1.8k
views
Biorad iCycler cfx manager files and HTqPCR
Microarray qPCR HTqPCR a4 Microarray qPCR HTqPCR a4
12.1 years ago b1gorsuch@comcast.net ▴ 20
0
votes
2
replies
1.7k
views
Compatibility of Biorad cfx files to HTqPCR?
qPCR HTqPCR qPCR HTqPCR
updated 14.0 years ago by ★ 2.0k • written 14.0 years ago by ▴ 10
0
votes
4
replies
1.7k
views
HTqPCR problems
qPCR GO Preprocessing GLAD HTqPCR qPCR GO Preprocessing GLAD HTqPCR
updated 12.7 years ago by ▴ 340 • written 12.7 years ago by ★ 2.0k
0
votes
0
replies
1.7k
views
FW: Using HTqPCR for Fluidigm BioMark input data (48.48 array)
Clustering HTqPCR Clustering HTqPCR
12.4 years ago Fletez-Brant, Christopher NIH/VRC [C] ▴ 60
0
votes
0
replies
1.7k
views
Problems importing (new) LightCycler data to HTqPCR
htqpcr dataimport
9.9 years ago H.H. • 0
0
votes
2
replies
1.7k
views
HTqPCR : readCtData problem?
miRNA qPCR HTqPCR miRNA qPCR HTqPCR
14.4 years ago Heidi Dvinge ★ 2.0k
0
votes
4
replies
1.7k
views
Reading in data with HTqPCR
qPCR Cancer cycle HTqPCR qPCR Cancer cycle HTqPCR
14.8 years ago Heidi Dvinge ★ 2.0k
0
votes
1
reply
1.7k
views
TLDA data
Clustering Cancer PROcess cycle HTqPCR Clustering Cancer PROcess cycle HTqPCR
updated 14.8 years ago by ★ 2.0k • written 14.8 years ago by ▴ 40
0
votes
4
replies
1.6k
views
HTqPCR normalization issues - third posting
Normalization HTqPCR Normalization HTqPCR
updated 11.4 years ago by ★ 1.1k • written 11.4 years ago by ▴ 330
0
votes
0
replies
1.6k
views
HTqPCR R Bioconductor question (problem reading SDS files for qPCR)
qPCR HTqPCR qPCR HTqPCR
14.2 years ago Alexander Williams ▴ 20
3
votes
1
reply
1.6k
views
Errors with HTqPCR v1.28.0 and BioC 3.4
HTqPCR
updated 8.2 years ago by ▴ 40 • written 8.4 years ago by ▴ 20
0
votes
1
reply
1.6k
views
HTqPCR problem with replicates
ddCt HTqPCR ddCt HTqPCR
updated 13.2 years ago by ★ 2.0k • written 13.2 years ago by ▴ 320
0
votes
1
reply
1.6k
views
HTqPCR question
HTqPCR HTqPCR
updated 14.3 years ago by ★ 2.0k • written 14.3 years ago by ▴ 340
0
votes
1
reply
1.6k
views
HTqPCR - how to read data file with multiple samples
HTqPCR a4 HTqPCR a4
updated 15.1 years ago by ★ 2.0k • written 15.1 years ago by ▴ 320
1
vote
2
replies
1.6k
views
No differential expression with limmaCtData possible
limma htqpcr
7.4 years ago h.roest • 0
0
votes
1
reply
1.5k
views
Possible bug in setCategory function from HTqPCR package
htqpcr HTqPCR
updated 8.5 years ago by • 0 • written 10.3 years ago by ▴ 830
1
vote
1
reply
1.5k
views
HTQPCR - create qPCR set from a matrix of CT values
HTqPCR
updated 4.2 years ago by 52k • written 9.3 years ago by ▴ 40
2
votes
1
reply
1.5k
views
HTqPCR- gene names not maintained in limmaCtData
annotate ddCt HTqPCR annotate ddCt HTqPCR
11.1 years ago Cornwell, Adam ▴ 110
0
votes
5
replies
1.5k
views
HTqPCR normalization issues - third posting
Normalization HTqPCR Normalization HTqPCR
updated 11.5 years ago by 68k • written 11.5 years ago by ★ 13k
0
votes
3
replies
1.5k
views
HTqPCR does not copy featureData when subsetting a qPCRset
htqpcr
updated 8.1 years ago by • 0 • written 8.2 years ago by ▴ 40
0
votes
2
replies
1.5k
views
HTqPCR
HTqPCR HTqPCR
updated 12.9 years ago by ★ 2.0k • written 12.9 years ago by ▴ 200
0
votes
0
replies
1.5k
views
structure of cfx file for HTqPCR
Microarray qPCR cycle HTqPCR Microarray qPCR cycle HTqPCR
12.1 years ago Guest User ★ 13k
0
votes
2
replies
1.5k
views
HTqPCR + setting flags as unreliable problem
htqpcr flags setCategory
10.3 years ago samantha.smith-4 • 0
0
votes
1
reply
1.4k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR htqpcr subsetting
updated 8.2 years ago by ▴ 40 • written 8.4 years ago by ★ 4.1k
0
votes
4
replies
1.4k
views
HTqPCR questions
qPCR HTqPCR qPCR HTqPCR
updated 14.2 years ago by ▴ 330 • written 14.2 years ago by ★ 2.0k
0
votes
2
replies
1.4k
views
HTqPCR - limmaCtData using samples with different number of replicates?
HTqPCR HTqPCR
updated 12.8 years ago by ★ 2.0k • written 12.8 years ago by ▴ 60
0
votes
0
replies
1.4k
views
doubt in HTqPCR
Cancer ddCt cycle HTqPCR ASSIGN Cancer ddCt cycle HTqPCR ASSIGN
13.5 years ago Heidi Dvinge ★ 2.0k
0
votes
1
reply
1.4k
views
loading AB OpenArray qPCR data in HTqPCR
miRNA microRNA HTqPCR miRNA microRNA HTqPCR
updated 13.6 years ago by ★ 2.0k • written 13.6 years ago by ★ 4.1k
0
votes
1
reply
1.4k
views
HTqPCR useful for ChIP data ?
Preprocessing Clustering HTqPCR Preprocessing Clustering HTqPCR
updated 2.4 years ago by • 0 • written 13.2 years ago by ▴ 10
0
votes
3
replies
1.4k
views
HTqPCR plotting groups of interest
HTqPCR HTqPCR
updated 12.7 years ago by ★ 2.0k • written 12.7 years ago by ▴ 340
0
votes
1
reply
1.3k
views
featureNames converted to numbers in limmaCtData
limma htqpcr
9.6 years ago julio.c.silver • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: Annotation package for Manduca sexta by GA ▴ 10
Thank you!
Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k
If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k
Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k
We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k
It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
Votes
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
A: Is logFC a log2 fold change or some other base in scran::findMarkers
Comment: Error in retrieving clinical data
What is the cheapest day to fly on American Airlines? {Ask_Expert}
Awards • All
Popular Question to Gordon Smyth 52k
Popular Question to mdeea123 ▴ 10
Popular Question to GA ▴ 10
Popular Question to Elizabeth • 0
Popular Question to Kent • 0
Locations • All
United Kingdom, 3 minutes ago
United Kingdom, 15 minutes ago
Germany, 59 minutes ago
Germany/Heidelberg/German Cancer Research Center, 1 hour ago
EMBL Heidelberg, 1 hour ago
Traffic: 766 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6