Bioconductor Install

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Install

updated 14 days ago by Arash • 0 • written 13 months ago by fenglingao • 0

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DNABarcodes Install

11 weeks ago • updated 10 weeks ago nk130 • 0

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Bioconductor Install affy

updated 5 months ago by ATpoint ★ 4.0k • written 16 months ago by laujihen • 0

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Install

5 months ago Alexander • 0

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DESeq2 SummarizedExperiment SparseArray Install DelayedArray

updated 5 months ago by Michael Love 41k • written 5 months ago by eg226 • 0

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Install instal

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by client.kashi • 0

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Bioconductor Install

updated 9 months ago by Mike Smith ★ 6.5k • written 9 months ago by Catia • 0

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Bioconductor Install library biocmanager

updated 9 months ago by Vincent J. Carey, Jr. 6.7k • written 9 months ago by Ndimensional ▴ 20

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Install msa

11 months ago Ido • 0

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Install impute

updated 11 months ago by yuzhijian • 0 • written 2.2 years ago by Aaron • 0

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Bioconductor Install

updated 12 months ago by ATpoint ★ 4.0k • written 12 months ago by 3305504122 • 0

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Bioconductor Install DESeq2

updated 3 months ago by picasa1983 • 0 • written 2.2 years ago by Victor • 0

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bioconductorpackages Install

updated 7 weeks ago by Guru • 0 • written 3.4 years ago by k200987 • 0

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Comment: DESeq2 setting significant p-value by Dev • 0

after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

But wouldn't this result in a different gene set for each analysis stratification? How can you then compare if maybe gene x comes up in Tim…

Comment: Reading huge bismark coverage files using bbseq::read.bismark by jacques.imbert • 0

Hello, Using nThread = 1L fixed the issue. Thank you for your time and help.

Comment: Error in champ.load(): The following specified files do not exist by Basti ▴ 760

The error stems from the Basename column, please see solution here : https://support.bioconductor.org/p/p132482/

Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

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Comment: Reading huge bismark coverage files using bbseq::read.bismark

Answer: Reading huge bismark coverage files using bbseq::read.bismark

Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

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