Bioconductor Install

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Bioconductor Install DESeq2

updated 4 months ago by picasa1983 • 0 • written 2.2 years ago by Victor • 0

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Bioconductor Install library biocmanager

updated 9 months ago by Vincent J. Carey, Jr. 6.7k • written 9 months ago by Ndimensional ▴ 20

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DESeq2 SummarizedExperiment SparseArray Install DelayedArray

updated 5 months ago by Michael Love 41k • written 5 months ago by eg226 • 0

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bioconductorpackages Install

updated 8 weeks ago by Guru • 0 • written 3.4 years ago by k200987 • 0

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Install impute

updated 11 months ago by yuzhijian • 0 • written 2.2 years ago by Aaron • 0

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bioconductor Install

5 days ago BioinfGuru ▴ 30

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DNABarcodes Install

12 weeks ago • updated 11 weeks ago nk130 • 0

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Install

5 months ago Alexander • 0

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Bioconductor Install affy

updated 5 months ago by ATpoint ★ 4.0k • written 16 months ago by laujihen • 0

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Install

updated 21 days ago by Arash • 0 • written 13 months ago by fenglingao • 0

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Install msa

11 months ago Ido • 0

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Bioconductor Install

updated 9 months ago by Mike Smith ★ 6.5k • written 9 months ago by Catia • 0

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Install instal

updated 5 months ago by James W. MacDonald 65k • written 5 months ago by client.kashi • 0

13 results • Page 1 of 1

Recent ...

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Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k

IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…

Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0

I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by shuwangxinze1996 • 0

Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough? Thank …

Comment: DESeq2 output used for PCA plot on R studio by Kevin Blighe ★ 3.9k

This comment helps.

Votes

A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?

A: How to explain how DESeq2 works to someone with zero bioinformatics background?

Answer: Interpret plot from DiffBind

Answer: How to retrieve gene ontology GO class from gene list?

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Supporter to JKim • 0