Biostar Iranges

Showing : Iranges • reset

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iranges

updated 9 weeks ago by Kristopher Villa • 0 • written 7.5 years ago by Michael Love 37k

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IRanges XVector AtomicList

9 weeks ago Pierre-Luc Germain • 0

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IRanges rtracklayer GenomicRanges

3 months ago vanbelj ▴ 10

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294

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IRanges

updated 9 months ago by Hervé Pagès 15k • written 9 months ago by story.benjamin ▴ 10

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Views IRanges GRanges RleList

updated 10 months ago by Mike Smith ★ 5.7k • written 10 months ago by Assa Yeroslaviz ★ 1.5k

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genomicranges genomicfeatures iranges

updated 4 weeks ago by mehdi • 0 • written 7.4 years ago by cookie ▴ 20

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granges genomicranges iranges subsetByOverlaps

updated 6 months ago by b.simpson • 0 • written 6.9 years ago by vinod.acear ▴ 50

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Comment: An ESR essay about software design, and how it applies to Bioconductor by Gary • 0

It's relevant for me, thank you for the information!

Comment: An ESR essay about software design, and how it applies to Bioconductor by Gary • 0

Thank you for sharing!

Comment: conditional command within GRanges by Basti ▴ 390

I can't reproduce your issue because you did not provided an example of your dataset (example with `dput(head(data1))`, but in the first ca…

Comment: Error in Create switchAnalyzeRlist by k.vitting.seerup ▴ 120

That sounds like you have the wrong version of the annotation compared to which version you used for the quantification?

Comment: Error in Create switchAnalyzeRlist by bpshtiwan ▴ 10

Great... now it is same. but still I have problem with four possibilities during using IsoformSwitchAnalyzeR. Knidly, any idea where is the…

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Answer: WHat is the difference between DEG and TopVarGenes in DESEq2?

A: EGSEA error during report generation: "only 0's may be mixed with negative subsc

Answer: mapToAlignments_issue

Analysis of peaks generated from Homer using Diffbind

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