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Comment: How to normalize long-read RNA-seq data for comparison with short-reads
by
Bernardo
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Just did that, thank you for the suggestion.
Comment: Empty ChipQC Report
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Okan
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Hi, I have the same issue. Have you found any solution or any reason why this is happening?
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
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Gordon Smyth
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Am I understanding correctly that you have 24 RNA-seq libraries in total, 6 from the pooled samples and 18 from regular samples with biolog…
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
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k.roelfs
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I'm sorry, I know it is kinda confusing...
We have 6 pools in total:
Phenotype A: T1a, T2, T1b, T1c
Phenotype B: T1, T2
Each pool consist…
Comment: edgeR: Usage of estimated dispersion from replicates for pools of the same exper
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Gordon Smyth
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Sorry, I don't understand your experiment.
You are reading the edgeR Section on on what to do without replicates, but your experiment appe…
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