Bioconductor LFC

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1.4k

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deseq2 LFC LRT

written 5.2 years ago by sally.badawi • 0

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1.5k

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deseq2 lfc betaprior

updated 17 months ago by Michael Love 41k • written 5.4 years ago by Mariaxi • 0

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771

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GLM prior DESeq LFC

updated 22 months ago by Michael Love 41k • written 22 months ago by stew • 0

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1.1k

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RNAseq LFC DEseq

2.9 years ago ayy2110 • 0

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13k

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deseq2 lfc coef contrast

updated 6.7 years ago by Michael Love 41k • written 6.7 years ago by Anke Busch ▴ 10

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2.7k

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limma microarray DEGs p values lfc

6.8 years ago rkp • 0

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17k

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deseq2 deseq lfc lfcse standard error

updated 7.0 years ago by rraadd_8 • 0 • written 7.1 years ago by tootiki • 0

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2.2k

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microarray limma multiple treatments lfc

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by brionyk9 • 0

8 results • Page 1 of 1

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Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by Tim Peters ▴ 170

Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…

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Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Answer: Differentially expressed genes in monocle pseudotime

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Scholar to Gordon Smyth 50k