Bioconductor LFCShrinkage

Showing : LFCShrinkage • reset

0

votes

1

reply

649

views

RNAseq lfcShrinkage DESeq2

updated 22 months ago by ATpoint ★ 4.0k • written 22 months ago by m.lorgen.06 • 0

2

votes

2

replies

981

views

Ashr LFCShrinkage IHW DESeq2

2.3 years ago Bex • 0

1

vote

7

replies

1.9k

views

lfcshrinkage DESeq2

updated 3.3 years ago by Michael Love 41k • written 3.3 years ago by nico • 0

3 results • Page 1 of 1

Recent ...

Replies

Answer: Cannabis and KEGGgraph by deeenes ▴ 30

Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…

Answer: RNAseq:Technical replicates from different batches by Gordon Smyth 50k

I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…

Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Votes

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Awards • All

Popular Question to James W. MacDonald 65k