Showing : Limma • reset
2
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Dealing with heteroscedascity in limma
limma splines Proteomics
written 5 days ago by • 0
5
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6
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2.0k
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limma correction for tumor purity
limma
updated 3 days ago by 52k • written 5 days ago by ▴ 20
0
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3
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671
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Model performance for spline modelling of RNA-seq timecourses in edgeR
edgeR limma
written 4 weeks ago by ▴ 10
0
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4
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502
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Check removeBatchEffect effectiveness
RNAseq limma removeBatchEffect
updated 5 days ago by 52k • written 14 days ago by • 0
0
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0
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229
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Significant Probes and Genes differ in Probe and Region level Differential Methylation Analyses
limma probe DMRcate GenomicRanges DifferentialMethylation
15 days ago jamiecatalano2 • 0
2
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1
reply
436
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ROAST for small sets
limma mroast
updated 18 days ago by 52k • written 19 days ago by • 0
2
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4
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1.6k
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how to use `arrayWeightsQuick()`?
limma
updated 5 days ago by • 0 • written 4 weeks ago by • 0
4
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0
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3.2k
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Evidence-based guidelines for use the method="robust" option in lmFit
Microarray Normalization Bayesian Regression Cancer limma Microarray Normalization Cancer
updated 5 days ago by • 0 • written 14.0 years ago by ★ 2.0k
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3
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RE:proper pooling design
Microarray Normalization affy makecdfenv limma marray Microarray Normalization affy limma
updated 27 days ago by • 0 • written 21.3 years ago by ▴ 70
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Comment: EuroBioC2023 abstract submission is open! by arden • 0
Woohoo! Abstract submission for EuroBioC2023 is open! Time to dust off my research and get those submissions ready. Hope to see some awesom…
Comment: Gene Ontology (GO) Analysis by GA ▴ 10
Thank you!
Comment: DESEQ2 - Correctly altering log2foldchange when switching comparison direction ( by sk • 0
If I use factor to create the Condition_SCR_vs_WT coef, then the other chefs would be Condition_KD1_vs_WT and Condition_KD2_vs_WT, but I ne…
Comment: How to load scRNA-seq data from GEO by petergrahamclark • 0
the paper I'm working off suggests removing all cells where the UMI is less than 2000. I assume we don't have enough data for umi counts. c…
Comment: How to load scRNA-seq data from GEO by Gordon Smyth 52k
I suggest you use readMM() as advised by James, but then do a massive amount of cell filtering before doing any other conversions or creati…
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Comment: How to load scRNA-seq data from GEO
limma correction for tumor purity
limma correction for tumor purity
Answer: limma correction for tumor purity
Answer: limma correction for tumor purity
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