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[Resolved] RcppArmadillo pckg ERRORS : non-zero exit status (and so DESeq2 also)
DESEq2
R
linux
RcppArmadillo
5.2 years ago
RS1
• 0
0
votes
4
replies
4.3k
views
Problems Installing biomaRt
biomart
linux
updated 3.3 years ago by
Martin Morgan
25k • written 6.0 years ago by
christopher.mcfall
• 0
0
votes
4
replies
2.8k
views
Unable to install Rcpp package for genefo
Rcpp
genefo
linux
linux mint
Rstudio
updated 7.7 years ago by
mfox
• 0 • written 7.7 years ago by
anjali.krishna1008
• 0
0
votes
2
replies
2.4k
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tximport ERROR : all(file.exists(files)) is not TRUE
Linux
R
tximport
2.1 years ago
nakane_clan
• 0
0
votes
6
replies
2.3k
views
Chipseeker is unavabile on Linux CentOS7 ?
Bioconduct or
Chipseeker
CentOS7
Linux
installation
updated 7.5 years ago by
Guangchuang Yu
★ 1.2k • written 7.5 years ago by
spsp9987
• 0
1
vote
4
replies
2.0k
views
Rsubread install problems on CentOS 6.8/R3.4.1/gcc/4.8.2
linux
rsubread
installation
updated 6.8 years ago by
Mike Smith
★ 6.5k • written 6.8 years ago by
hjmangalam
• 0
1
vote
0
replies
1.4k
views
Problems running oligo functions in parallel on a linux computer
biocparallel
oligo
rma
linux
parallel
6.3 years ago
s.munster
▴ 40
1
vote
6
replies
1.3k
views
How to install DEXSeq on R 3.4.4
DEXSEq
Linux
updated 5.0 years ago by
Alejandro Reyes
★ 1.9k • written 5.0 years ago by
justinkablan225
• 0
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.4 years ago by
Mike Smith
★ 6.5k • written 6.6 years ago by
maxime.fortin
• 0
0
votes
1
reply
1.2k
views
R slow, using all physical memory and 20GB Virt
linux
r
phylogenetic
computational biology
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
guilherme
• 0
3
votes
1
reply
1.2k
views
best server maintenance practices
linux
R
server
updated 9.6 years ago by
James W. MacDonald
65k • written 9.6 years ago by
Matthew McCormack
▴ 180
0
votes
0
replies
1.2k
views
Job:
Bioinformatics Engineer / Data Analyst
python
bio
ngs
linux
Job
6.1 years ago
EMBL Recruitment
• 0
0
votes
0
replies
984
views
Job:
Bioinformatician ('CHBIO15) (m/f)
bioinformatician job
Linux
NGS
Job
5.4 years ago
l.brown
▴ 10
0
votes
1
reply
977
views
ChemmineOB Installation RHEL
ChemmineOB
Linux
Installation
5.1 years ago
jandrosavich
• 0
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Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
by
isaac.vock
• 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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