Showing : MNN • reset
3
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6
replies
3.2k
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Carry over variable features when converting FastMNN SCE object to Seurat object
mnn batchelor scrna-seq seurat
updated 4.3 years ago by ★ 28k • written 4.3 years ago by • 0
2
votes
2
replies
1.8k
views
Subclustering after MNN batch-correction
batchelor mnn scrna-seq
updated 2.1 years ago by ▴ 40 • written 4.7 years ago by • 0
0
votes
2
replies
1.0k
views
Help with the output from mnnCorrect
mnnCorect MNN
4.9 years ago sharvari gujja ▴ 40
2
votes
1
reply
2.2k
views
Batch Corrections (MNN) with TPM values
scRNA-Seq scater scran rna-seq MNN
updated 4.9 years ago by ★ 28k • written 4.9 years ago by ▴ 60
4 results • Page 1 of 1
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Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS by semra • 0
install(Biostrings, force = TRUE) Error in install(Biostrings, force = TRUE) : install fonksiyonu bulunamadı > library(Biostrings) Erro…
Comment: AffylmGUI does not start wit R 4.4.1 by richardallenfriedmanbrooklyn ▴ 20
Dear List, AffylmGUI works fine with R 4.4.1 on Windows. However most of my students have macs. I have installed BWidget and Tktable in the…
Answer: PCA analysis RNA-Seq QC looks strange? by swbarnes2 ★ 1.4k
In my experience, when the first PC is 91% of the difference, its because you are looking at two different tissues. Check to see what gene…
Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS by James W. MacDonald 67k
What is the output from ``` install("Biostrings, force = TRUE) library(Biostrings) ```
Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic by Michael Love 42k
I request the post here, so not a problem.
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Save the Date for EuroBioC2025 in Barcelona!
Time course experiment using limma
DEXseq: How to do differential exon usage of genes with overlapping exons
A: Moderated F-test followed by moderated t-test in limma
Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
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