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Mac
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reset
3
votes
4
replies
2.8k
views
R Error: package ‘GenomeInfoDb’ could not be loaded on MacBook
error
mac
DESeq2
GenomeInfoDb
R
3.3 years ago • updated 3.2 years ago
Dan
▴ 20
0
votes
1
reply
1.2k
views
problem loading gwascat and ggbio
gwascat
ggbio
Mac
7.8 years ago
jameshunterbr
• 0
0
votes
1
reply
1.3k
views
MSGFplus: fail to load on Mac OSX 10.13.6 due to javaVersion error
msgfplus
mac
java
updated 5.8 years ago by
Mike Smith
★ 6.5k • written 5.8 years ago by
dgemoets
• 0
0
votes
3
replies
987
views
Problem installing biomaRt on mac
biomaRt
mac
updated 8 months ago by
15753563659
▴ 50 • written 17 months ago by
alfonsosaera
• 0
0
votes
13
replies
2.6k
views
error message with BiocManager::install on Mac console that's not on mac command line
BiocManager
Mac
updated 4.8 years ago by
Martin Morgan
25k • written 4.8 years ago by
raf4
▴ 20
4
votes
2
replies
1.8k
views
The Mac version of R always reports an error when installing WGCNA
software error
WGCNA
mac
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
562125035
• 0
2
votes
3
replies
1.4k
views
bplapply - only SerialParam or single worker Multicore working on R/macos 10.14
BiocParallel
mac
R
updated 5.1 years ago by
Martin Morgan
25k • written 5.1 years ago by
geo.vogler
▴ 10
0
votes
2
replies
1.1k
views
Usinig BiocParallel package in R with M1 MAC
RStudio
R
M1
BiocParallel
Mac
updated 15 months ago by
Christian Mertes
• 0 • written 17 months ago by
me.achleitner
• 0
0
votes
1
reply
1.6k
views
Problem with installation of rhdf5 on R 3.2.0 Mac Yosemite 10.10.4
rhdf5
r
mac
8.7 years ago
ambageo
• 0
9 results • Page
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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…
Answer: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…
Votes
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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