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Meta Analysis
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metaDE R and RRA R
microarray
meta analysis
5.0 years ago
lily
▴ 20
0
votes
1
reply
715
views
Meta_analysis of microarray data
microarray
microarray data
Meta Analysis
platform
updated 6.0 years ago by
James W. MacDonald
68k • written 6.0 years ago by
Jamal
• 0
0
votes
1
reply
1.4k
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Meta_analysis of different platforms of microarray data
microarray
meta analysis
cancer
Software
R
updated 6.1 years ago by
James W. MacDonald
68k • written 6.1 years ago by
Jamal
• 0
0
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0
replies
735
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how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA
pvalcombination
meta analysis
metaMA
DEGs' indices
6.8 years ago
niteshkumar20sept
• 0
0
votes
1
reply
936
views
meta de r package
meta analysis
7.2 years ago
lily
▴ 20
1
vote
0
replies
1.2k
views
Meta Analysis on CAMERA results
limma
camera
cohen d
meta analysis
8.0 years ago
Andy91
▴ 60
0
votes
1
reply
1.4k
views
meta analysis of clc output(differential expression data )
rnaseq
metaseq
clc output
pvalue
meta analysis
updated 8.1 years ago by
Koki
▴ 10 • written 8.1 years ago by
hassangiahi
• 0
2
votes
3
replies
2.0k
views
combine different GSE on different GPL
annotation
genesymbols
meta analysis
8.9 years ago • updated 8.8 years ago
wahaha123
• 0
8 results • Page
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Comment: batch effect removal for agilent microarray data
by
gaye.yilmaz
• 0
Thank you
Answer: Pathview visualisation not including positive log2 fold changes
by
James W. MacDonald
68k
Without providing a self-contained example, nobody can tell you if/where you went wrong. Since you get a KEGG pathway with some of the gene…
Comment: Differential variance analysis - can i use deseq2
by
Marwan
• 0
Thanks Michael for your answer, i didnt mean to use Deseq2 directly for the variance testing, but more like asking if using the (VST) data…
Answer: Differential variance analysis - can i use deseq2
by
Michael Love
43k
We don't have a test of differential variance but other Bioconductor packages can, check similar posts (even on the right side bar) or use …
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
It seems likely this was installed as an admin account and a user account would not be able to update. Someone with admin access should run…
Votes
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
A: How to extract DESeq2 results for an interaction design
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
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