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Meta Analysis
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2
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3
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2.5k
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combine different GSE on different GPL
annotation
genesymbols
meta analysis
9.8 years ago
wahaha123
• 0
1
vote
0
replies
1.4k
views
Meta Analysis on CAMERA results
limma
camera
cohen d
meta analysis
9.0 years ago
Andy91
▴ 60
0
votes
1
reply
1.1k
views
meta de r package
meta analysis
8.2 years ago
lily
▴ 20
0
votes
0
replies
903
views
how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA
pvalcombination
meta analysis
metaMA
DEGs' indices
7.8 years ago
niteshkumar20sept
• 0
0
votes
1
reply
1.6k
views
Meta_analysis of different platforms of microarray data
microarray
meta analysis
cancer
Software
R
updated 7.1 years ago by
James W. MacDonald
68k • written 7.1 years ago by
Jamal
• 0
0
votes
1
reply
882
views
Meta_analysis of microarray data
microarray
microarray data
Meta Analysis
platform
updated 7.0 years ago by
James W. MacDonald
68k • written 7.0 years ago by
Jamal
• 0
0
votes
0
replies
1.6k
views
metaDE R and RRA R
microarray
meta analysis
6.0 years ago
lily
▴ 20
0
votes
1
reply
1.7k
views
meta analysis of clc output(differential expression data )
rnaseq
metaseq
clc output
pvalue
meta analysis
updated 9.1 years ago by
Koki
▴ 10 • written 9.1 years ago by
hassangiahi
• 0
8 results • Page
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Answer: Subsetting data verses contrasts [DESeq2]?
by
ATpoint
★ 5.0k
This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …
Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you so much for your help! will try to proceed with the suggestion
Comment: Bulk RNAseq analysis for
by
Mariami
• 0
Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…
Answer: Bulk RNAseq analysis for
by
Gordon Smyth
53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Answer: Bulk RNAseq analysis for
by
James W. MacDonald
68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
Votes
Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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