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MotifbreakR
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872
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motifBreakR error with custom BSgenome
GenomeInfoDb
motifbreakR
3.0 years ago
Chris Seidel
▴ 80
0
votes
0
replies
868
views
How are the MotifbreakR scores calculated, and how do they relate to one another?
MotifbreakR
R
motifs
5.0 years ago
camerond
• 0
2
votes
5
replies
2.5k
views
Error with R package motifbreakR while trying to read a vcf file with snps.from.file function
motifbreakR
vcf
snps
motif analysis
updated 5.8 years ago by
Valerie Obenchain
★ 6.8k • written 5.8 years ago by
svlachavas
▴ 830
0
votes
0
replies
844
views
Motif Breaker error
bioconductor
motifbreakr
plotmb
6.4 years ago
priyankaraina10
• 0
0
votes
2
replies
1.2k
views
motifbreakR VariantAnnotation namespace error on reading vcf file
motifbreakR
variantannotation
updated 8.5 years ago by
Simon Coetzee
▴ 50 • written 8.5 years ago by
ashley.doane
▴ 20
5 results • Page
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Comment: How to retrieve detailed regression results from deseq2
by
Weiqian
▴ 10
Hi Michael, thanks for the answer! I'll have a look : )
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts
by
Carlin95
• 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size
by
Jonathan
▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Seyram M.
• 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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