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NMF
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0
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1
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2.7k
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NMF installation with current R version
NMF
Biobase
updated 22 months ago by
shepherl
3.8k • written 22 months ago by
Abhishek
• 0
5
votes
5
replies
1.6k
views
Running NMF for single cell
NMF
scater
3.5 years ago
lirongrossmann
▴ 40
0
votes
0
replies
398
views
NMF in single cell analysis
NMF
ZeiselBrainData
3.7 years ago
sofia.puvogel
• 0
0
votes
0
replies
1.3k
views
Error in NMF estimation
MutationalPatterns
NMF
4.9 years ago
TRASA
• 0
0
votes
7
replies
2.9k
views
nmf function not working
somaticsignatures
NMF
updated 5.4 years ago by
Xin
• 0 • written 5.7 years ago by
aslam.mohammed398
• 0
0
votes
0
replies
769
views
NMF pre-processsing effect on classification
NMF
log2
classification
bioconductor
5.8 years ago
Seymoo
• 0
0
votes
1
reply
1.0k
views
SomaticSignatures for Bioconductor 3.6 (R 3.4.3) depends on NMF, which is not available for R 3.4.3
NMF
somaticsignatures
R 3.4.3
updated 6.1 years ago by
shepherl
3.8k • written 6.1 years ago by
samuel.fux
• 0
0
votes
6
replies
2.7k
views
Somaticsignature NMF problem
somaticsignatures
NMF
updated 6.5 years ago by
grimmmmer
• 0 • written 7.1 years ago by
ns
• 0
0
votes
4
replies
2.3k
views
DESeq2, outlier correction, Combat, NMF
deseq2
combat
outliers
NMF
updated 6.8 years ago by
Michael Love
41k • written 6.8 years ago by
noname
• 0
0
votes
0
replies
1.1k
views
Defining metagenes from NMF in methylation array data - next step?
NMF
minfi
8.1 years ago
yura.grabovska
▴ 30
0
votes
2
replies
1.1k
views
coefmap plot - label colors
affy
coefmap
nmf
updated 8.2 years ago by
James W. MacDonald
65k • written 8.2 years ago by
thrabe
• 0
0
votes
1
reply
1.6k
views
SomaticSignatures: negative entries after ComBat adjustment
sva
somaticsignatures
batch effect
nmf
updated 8.3 years ago by
Jeff Leek
▴ 650 • written 8.3 years ago by
kw10
• 0
0
votes
1
reply
1.4k
views
NMF Package error
NMF
bioconductor
R
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
Deepak Tanwar
▴ 10
13 results • Page
1 of 1
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Replies
Comment: error when using M-values in ChAMP
by
hortenseguillaume96
• 0
Hello Tian, I'd like to get the M-values matrix so that I can carry out a linear regression study. However, when I apply the champ.load fu…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
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