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20
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News: markdown is coming to the support site
markdown News
4.8 years ago • updated 4.2 years ago Lucas Schiffer ▴ 240
14
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8
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1.7k
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News: Bioconductor packages now each have a DOI.
doi citation News
updated 4.7 years ago by 25k • written 4.7 years ago by 21k
13
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2.3k
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News: Updated Bioconductor Package Submission Policy
package submission News
6.4 years ago Martin Morgan 25k
12
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5
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1.2k
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News: DOI for packages
DOI doi packages citation publication News
4.6 years ago shepherl 3.1k
11
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565
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News: Rsubread now available for Windows
rsubread News
2.7 years ago Gordon Smyth 45k
11
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0
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1.6k
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News: Bioconductor 3.0 is released!
news News
7.6 years ago • updated 7.5 years ago Dan Tenenbaum ★ 8.2k
10
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0
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2.1k
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News: Professor James Taylor
in memoriam News
2.1 years ago Martin Morgan 25k
10
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15
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2.0k
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News: BioC 2017: Where Software and Biology Connect, 26 / 27 - 28 July, Boston, MA
conference bioc2017 News
5.2 years ago • updated 4.8 years ago Martin Morgan 25k
10
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3
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2.3k
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News: Updates to BiocStyle formatting
BiocStyle vignettes rmarkdown latex News
4.8 years ago • updated 4.7 years ago Andrzej Oleś ▴ 750
10
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0
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1.2k
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News: European Bioconductor meeting 2017, 4 / 5 - 6 December, Cambridge, UK
news conference eurobioc2017 News
4.7 years ago • updated 4.5 years ago Aaron Lun ★ 27k
9
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7
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2.2k
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News: Conference: BioC 2016: Where Software and Biology Connect, Stanford, 24-26 June
BioC2016 Conference News
updated 5.9 years ago by 3.1k • written 6.3 years ago by 25k
9
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8
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5.7k
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News: new package `ggtree` in devel branch
ggtree phylogenetic News
updated 7.2 years ago by ▴ 10 • written 7.3 years ago by ★ 1.2k
9
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4
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2.1k
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News: Experimental data package 'seqc'
seqc rsubread featurecounts subjunc ercc News
7.5 years ago Wei Shi ★ 3.4k
9
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1
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1.7k
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News: Ensembl release 80 is out!
biomart Ensembl zebrafish Rat 1000 genomes phase 3 News
updated 7.0 years ago by ▴ 380 • written 7.0 years ago by ▴ 790
8
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1
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2.3k
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News: Bioconductor 3.5 is released
bioconductor news release News
updated 5.0 years ago by 15k • written 5.1 years ago by ★ 6.7k
8
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0
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1.1k
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News: Recent course materials now easily searchable
course-material News
updated 7.6 years ago by 13k • written 7.7 years ago by ★ 8.2k
8
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10
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1.3k
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News: Bioconductor 3.2 is released!
news News
updated 6.6 years ago by ▴ 40 • written 6.6 years ago by ★ 8.2k
8
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2
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795
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News: BioCAsia, 29-30th November 2018, Melbourne, Australia
news conference training News
updated 3.5 years ago by 45k • written 3.7 years ago by ▴ 170
7
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5
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2.0k
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News: European Bioconductor Developers Meeting: Cambridge 7/8th December 2015
developers conference workshop News
updated 6.6 years ago by 1.5k • written 6.7 years ago by ★ 1.1k
7
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4
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1.2k
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News: Bioconductor 3.7 is released
bioconductor release News
updated 4.0 years ago by • 0 • written 4.0 years ago by ★ 6.7k
7
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1
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814
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News: Bioconductor Community Advisory Board Nominees
news community bioconductor oversight News
updated 2.3 years ago by 21k • written 2.3 years ago by ▴ 1000
7
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0
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1.4k
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News: Announcing Docker containers for Bioconductor
docker News
7.4 years ago Dan Tenenbaum ★ 8.2k
6
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1
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726
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News: BioC2019 June 24-27 in New York City
conference News
3.6 years ago Levi Waldron 1.1k
6
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0
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790
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News: New Package Submission Process
news package submit package News
updated 6.0 years ago by 25k • written 6.0 years ago by ★ 6.7k
6
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6
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2.4k
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News: Bioconductor Git/GitHub Mirrors
git github git-svn bridge subversion News
updated 6.9 years ago by ★ 1.2k • written 6.9 years ago by ★ 8.2k
6
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0
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1.4k
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News: Bioconductor 3.4 is released
news announcement release News
5.6 years ago Hervé Pagès 15k
6
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0
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1.6k
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News: BioC 2015 Annual Conference
BioC2015 News
7.1 years ago • updated 6.9 years ago Martin Morgan 25k
6
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0
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1.9k
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News: F1000 research sponsored prize for contribution to Support forum
news News
6.5 years ago Mark Dunning ★ 1.1k
6
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0
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1.8k
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News: Bioconductor git server is now LIVE!
git github svn git-svn bridge git mirror News
4.8 years ago nitesh.turaga 140
6
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0
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612
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News: Bioconductor Technical Advisory Board
bioconductor oversight News
3.0 years ago Martin Morgan 25k
6
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0
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790
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News: Winners of the 1st Shiny Contest: iSEE
iSEE shiny summarizedExperiment News
3.1 years ago Aaron Lun ★ 27k
6
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0
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388
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News: Bioconductor 3.10 is released!!
release software packages bioconductor News
2.5 years ago shepherl 3.1k
6
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3
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News: New Bioconductor package for dbSNP151
SNPlocs.Hsapiens.dbSNP151.GRCh38 BSgenome News
3.9 years ago Hervé Pagès 15k
5
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5
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News: Ensembl 88 is out!
ensembl ensembl mart biomart e!88 News
5.1 years ago Thomas Maurel ▴ 790
5
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7
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1.0k
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News: Updated support site
news News
7.6 years ago Martin Morgan 25k
5
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0
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612
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News: Bioconductor 3.6 is released
bioconductor news release News
4.5 years ago Valerie Obenchain ★ 6.7k
5
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1
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2.6k
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News: Bioconductor-related papers -- special F1000Research collection for Bioc2016
publication workflows benchmark teaching News
updated 6.1 years ago by ▴ 10 • written 6.1 years ago by 13k
5
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0
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850
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News: October Newsletter now available
newsletter News
7.6 years ago Valerie Obenchain ★ 6.7k
5
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0
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726
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News: Bioconductor Newsletter: January 2016
news newsletter bioconductor News
6.4 years ago Valerie Obenchain ★ 6.7k
5
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5
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2.1k
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News: Invitation to submit articles to the Bioconductor gateway on F1000Research
publication News
4.1 years ago Sean Davis 21k
5
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0
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3.6k
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News: Bioconductor Package Archives
bioconductor archive news News
4.5 years ago Valerie Obenchain ★ 6.7k
5
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0
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1.6k
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News: edX online course introducing Bioconductor now up and running
annotation bioconductor News
updated 4.4 years ago by 25k • written 4.4 years ago by 6.6k
5
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1
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1.2k
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News: Bioc2015 conference ongoing now.
bioconductor conference News
6.8 years ago Sean Davis 21k
5
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2
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1.8k
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News: Ensembl release 81 is out!
human mouse GRCh38 biomart Ensembl News
updated 6.8 years ago by ▴ 380 • written 6.8 years ago by ▴ 790
5
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2
replies
812
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News: BioC2019 talk/workshop/scholarship submission deadline MARCH 15
BioC2019 News
updated 3.2 years ago by ★ 4.3k • written 3.2 years ago by 1.1k
5
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0
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712
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News: Course announcement: Statistical Data Analysis for Genome Scale Biology (CSAMA) - Brixen, Italy 21-26 July 2019
csama News
3.2 years ago Wolfgang Huber 13k
4
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0
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1.2k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
Course News
7.6 years ago • updated 7.5 years ago Wolfgang Huber 13k
4
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1
reply
695
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News: About the recent flurry of spam posts
security spam News
6.1 years ago Dan Tenenbaum ★ 8.2k
4
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11
replies
958
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News: Bioconductor 3.8 is released
bioconductor news release News
updated 3.4 years ago by • 0 • written 3.5 years ago by ★ 6.7k
4
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1
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1.2k
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
course workshop News
5.3 years ago • updated 5.2 years ago Laurent Gatto 1.5k
50 results • Page 1 of 1
Recent ...
Replies
Comment: rtracklayer S.h by gibran • 0
Thanks, much appreciated. So I think this approach actually gets binaries and I'm not sure how to isolate the problem I was experiencing as…
Comment: DESeq2, Calculate the size factor by using median-of-ratio by KEREN • 0
Hi Michael, thank you for you reply. My concern here mainly focus on the high variances in samples of condition "mESC_mRNA_WT". I observed…
Comment: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by Rory Stark ★ 4.4k
I agree the documentation could be clearer -- it took me a while to understand what it said so I could address your issue!
Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by chrarnold • 0
Thanks a lot for your quick reply, it is very appreciated! Indeed, with your 2 suggested modifications, I can again reproduce the results f…
Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by Rory Stark ★ 4.4k
The object in the `.rds` file, `sampleMetaData.df`, is already a `DBA` object, with eight samples: > sampleMetaData.df <- readRDS("~/D…
Votes
Answer: rtracklayer S.h
Answer: rtracklayer S.h
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
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