Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Outlier
•
reset
4
votes
5
replies
6.5k
views
outlier detection of RNAseq samples
deseq2
rnaseq
PCA
hierarchical clustering
outlier
7.4 years ago
wd
▴ 30
2
votes
3
replies
1.5k
views
RNAseq outlier is a critical sample
rnaseq
outlier
statistics
batch effect
updated 7.9 years ago by
Gordon Smyth
50k • written 7.9 years ago by
grastalt27
• 0
0
votes
2
replies
1.2k
views
Which genes are outliers in DESeq2?
DESeq2
RNAseq
outlier
updated 14 months ago by
ATpoint
★ 4.0k • written 14 months ago by
James
• 0
1
vote
8
replies
1.9k
views
[Outlier Gene removal] - One sample with outlier counts for some genes
RNAseq
DESeq2
outlier
counts
DE analysis
updated 3.9 years ago by
Kevin Blighe
★ 3.9k • written 3.9 years ago by
DcL-A
• 0
1
vote
7
replies
4.5k
views
DESeq2 outlier detection not filtering
DESeq2
outlier
RNASeq
updated 9.4 years ago by
Michael Love
41k • written 9.4 years ago by
kenneth.daily
• 0
0
votes
1
reply
436
views
Outlier removal outcome
Outlier
updated 13 months ago by
ATpoint
★ 4.0k • written 13 months ago by
sanchita.bhattacharya
• 0
1
vote
1
reply
1.3k
views
arrayQualityMetrics for outlier detection
arrayQualityMetrics
Microarray
Outlier
updated 8.4 years ago by
Wolfgang Huber
★ 13k • written 8.4 years ago by
horcsct
▴ 10
1
vote
3
replies
725
views
DE analysis outlier removal
deseq2
outlier
normalization
removal
updated 4.1 years ago by
Michael Love
41k • written 4.1 years ago by
knholm
• 0
8 results • Page
1 of 1
Recent ...
Replies
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp
by
clacarion
• 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp
by
clacarion
• 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
Votes
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
i.sudbery
▴ 40
Scholar
to
Michael Love
41k
Popular Question
to
shepherl
3.8k
Popular Question
to
taur.vil
• 0
Locations
• All
United States,
8 minutes ago
France,
8 minutes ago
United States,
16 minutes ago
WEHI, Melbourne, Australia,
23 minutes ago
United States,
44 minutes ago
Traffic: 655 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6