Bioconductor PCATools

Showing : PCATools • reset

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334

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edgeR PCAtools

updated 23 days ago by Gordon Smyth 50k • written 25 days ago by Fabian • 0

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3.5k

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ellipse RNAseq PCAtools

updated 12 months ago by CP • 0 • written 2.9 years ago by elizabethe819 • 0

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1.1k

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Biplot FactoMineR proteomics PCAtools ellipse

updated 15 months ago by Kevin Blighe ★ 3.9k • written 15 months ago by M Tuhin • 0

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933

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illumina PCAtools PCA

updated 17 months ago by Kevin Blighe ★ 3.9k • written 17 months ago by ilaria.debenedictis • 0

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844

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PCAtools bioconductor

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by pterry • 0

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1.1k

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PCAtools pcaExplorer pcaMethods

updated 22 months ago by Federico Marini ▴ 150 • written 22 months ago by m610110001 • 0

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2.4k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.0 years ago Alan • 0

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822

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PCAtools

3.1 years ago luca.s ▴ 50

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2.6k

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PCAtools

updated 3.2 years ago by Kevin Blighe ★ 3.9k • written 3.2 years ago by Terra • 0

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3.2k

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biplot PCA RNASeq PCAtools

updated 3.3 years ago by Kevin Blighe ★ 3.9k • written 3.3 years ago by mschmidt ▴ 10

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1.7k

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PCAtools biplot DESeq2 RNASeq PCA

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by ecg1g15 ▴ 20

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1.4k

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PCATools

updated 3.5 years ago by Kevin Blighe ★ 3.9k • written 3.5 years ago by oakhamwolf • 0

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1.5k

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EDA pcaExplorer PCAtools PCA

updated 2.3 years ago by Miguel ▴ 10 • written 3.7 years ago by k.vitting.seerup ▴ 120

13 results • Page 1 of 1

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Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Michael Love 41k

I don't really have any additional suggestion here.

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Dear Michael, I tried all three ways (the orIginal, increasing the number of required samples,and subsetting (the countdata and metadata be…

Comment: DESeq2 - dispersion estimation when there is none by Michael Love 41k

The red line does assume that shape but the fact the black points show that pattern is discussed in the 2014 paper. > Some caution is warr…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 65k

I don't really follow what you are saying. All you have to do is delete the NCBI.sqlite db and *re-run the script exactly as you did above.…

Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Votes

Comment: DESeq2 - dispersion estimation when there is none

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Awards • All

Scholar to Michael Love 41k