Bioconductor PCAtools

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3.5k

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ellipse RNAseq PCAtools

updated 12 months ago by Paola • 0 • written 2.9 years ago by elizabethe819 • 0

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3.2k

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biplot PCA RNASeq PCAtools

updated 3.3 years ago by Kevin Blighe ★ 3.9k • written 3.3 years ago by mschmidt ▴ 10

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2.6k

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PCAtools

updated 3.2 years ago by Kevin Blighe ★ 3.9k • written 3.2 years ago by Terra • 0

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2.4k

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PCAtools edgeR pcaExplorer RNASeq RNAseq123

2.0 years ago Alan • 0

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1.7k

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PCAtools biplot DESeq2 RNASeq PCA

updated 3.4 years ago by Kevin Blighe ★ 3.9k • written 3.4 years ago by ecg1g15 ▴ 20

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1.5k

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EDA pcaExplorer PCAtools PCA

updated 2.3 years ago by Miguel ▴ 10 • written 3.7 years ago by k.vitting.seerup ▴ 120

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1.4k

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PCATools

updated 3.5 years ago by Kevin Blighe ★ 3.9k • written 3.5 years ago by oakhamwolf • 0

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Biplot FactoMineR proteomics PCAtools ellipse

updated 15 months ago by Kevin Blighe ★ 3.9k • written 15 months ago by M Tuhin • 0

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1.1k

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PCAtools pcaExplorer pcaMethods

updated 22 months ago by Federico Marini ▴ 150 • written 22 months ago by m610110001 • 0

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931

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illumina PCAtools PCA

updated 17 months ago by Kevin Blighe ★ 3.9k • written 17 months ago by ilaria.debenedictis • 0

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839

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PCAtools bioconductor

updated 21 months ago by James W. MacDonald 65k • written 21 months ago by pterry • 0

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818

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PCAtools

3.1 years ago luca.s ▴ 50

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325

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edgeR PCAtools

updated 19 days ago by Gordon Smyth 50k • written 21 days ago by Fabian • 0

13 results • Page 1 of 1

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Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

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Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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Popular Question to James W. MacDonald 65k