Biostar PCR

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limma pcr

updated 4.0 years ago by Gordon Smyth 45k • written 8.6 years ago by Sandhya Pemmasani Kiran ▴ 40

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fluidigm normalization limma pcr

updated 5.5 years ago by Gordon Smyth 45k • written 5.5 years ago by raf4 ▴ 20

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nondetects R PCR

updated 4.9 years ago by Matthew McCall ▴ 830 • written 4.9 years ago by garciaii_antuerpia • 0

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PCR DECIPHER PNA

2.8 years ago marissaruthlee • 0

4 results • Page 1 of 1

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Comment: Confused about the CPM and TMM normalization in edgeR by Mohamed • 0

Sorry for misunderstanding. What I meant was that there is always two option of using cpm on DGElist as shown in my above codes: Option 1:…

Answer: Number of rows in DESeq2 output (.csv) is not the same as number of rows in the by Jamie • 0

I think I found the problem, DESeq2 or R could not deal with 5' and 3' or mentionings of commas in the gene names, so after conversion to '…

Comment: Number of rows in DESeq2 output (.csv) is not the same as number of rows in the by Basti ▴ 330

Are you sure you checked the right file ? There is no reason for `as.data.frame(res)` to add lines. please check `library(readr); deseq2res…

Comment: Error while running DESeq2 by srikar • 0

Okay. Thank you.

Comment: How to get DESeq2 results for a list of genes by Lucía ▴ 10

I did thank you, I just gave you some feedback in addition to that, which btw is not the same as "complaining". I didn't even bring this up…

Votes

A: Appropriate explanation of the methodology behind arrayWeights function from lim

Comment: Error while running DESeq2

A: How to handle the change in resultsNames() for DESeq2 ?

C: How to handle the change in resultsNames() for DESeq2 ?

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