Bioconductor Prostar

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Prostar

2.2 years ago benoit.marchand • 0

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1.1k

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Prostar

updated 23 months ago by Wang • 0 • written 2.4 years ago by benoit.marchand • 0

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726

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prostar proteomics

5.8 years ago laural710 • 0

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prostar proteomics rforproteomics annotationforge

updated 5.9 years ago by Samuel Wieczorek ▴ 10 • written 5.9 years ago by lolli.langan ▴ 20

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1.2k

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Prostar Dapar clusterprofiler

updated 6.0 years ago by Samuel Wieczorek ▴ 10 • written 6.0 years ago by laural710 • 0

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999

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install error package installation DAPAR prostar R version 3.4.4

6.0 years ago rita.reig • 0

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1.4k

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Prostar

updated 6.4 years ago by Samuel Wieczorek ▴ 10 • written 7.5 years ago by kamal.fartiyal84 ▴ 10

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1.3k

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Prostar DAPAR software error

updated 6.4 years ago by Samuel Wieczorek ▴ 10 • written 6.5 years ago by van.theodorakis • 0

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Comment: Input Question for deseq.r by ATpoint ★ 4.0k

It is unclear what "deseq.r" is. It is not part of DESeq2, and almost certainly no part of RSeqAn. Please add details, and keep in mind tha…

Answer: DESEQ2 output gives multiple groups when only 2 groups are present by ATpoint ★ 4.0k

In the first PCA plot there is almost certainly some hidden character like whitespaces in the column from colData that encodes this group. …

Answer: A ComBat-seq issue: the covariates are confounded by ATpoint ★ 4.0k

```r > table(batch, group) group batch egfr gfp her2 1 0 12 5 2 6 6 0 ``` All of her2 is batch2, all of egfr i…

Comment: DESeq2 setting significant p-value by Dev • 0

after running DESeq2 does it sort the value on the basis of pvalue, or anything, or does it give the data back in the input format I have …

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

But wouldn't this result in a different gene set for each analysis stratification? How can you then compare if maybe gene x comes up in Tim…

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Comment: Reading huge bismark coverage files using bbseq::read.bismark

Answer: Reading huge bismark coverage files using bbseq::read.bismark

Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

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