Bioconductor Prostar

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803

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Prostar

2.2 years ago benoit.marchand • 0

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1.1k

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Prostar

updated 23 months ago by Wang • 0 • written 2.4 years ago by benoit.marchand • 0

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726

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prostar proteomics

5.8 years ago laural710 • 0

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1.3k

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prostar proteomics rforproteomics annotationforge

updated 5.9 years ago by Samuel Wieczorek ▴ 10 • written 5.9 years ago by lolli.langan ▴ 20

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1.2k

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Prostar Dapar clusterprofiler

updated 6.0 years ago by Samuel Wieczorek ▴ 10 • written 6.0 years ago by laural710 • 0

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1.0k

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install error package installation DAPAR prostar R version 3.4.4

6.0 years ago rita.reig • 0

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1.3k

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Prostar DAPAR software error

updated 6.5 years ago by Samuel Wieczorek ▴ 10 • written 6.5 years ago by van.theodorakis • 0

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1.4k

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Prostar

updated 6.5 years ago by Samuel Wieczorek ▴ 10 • written 7.5 years ago by kamal.fartiyal84 ▴ 10

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Comment: Differential peaks that were not identified in diffbind were identified in diseq by ATpoint ★ 4.0k

As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…

Comment: Problem for loading Bioconductor package in R by touchstoneeduseo • 0

Touchstone is your gateway to English language proficiency! Our institute offers tailored courses designed to prepare students for success …

Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0

Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…

Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k

I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …

Comment: Theoretical WGCNA Question by Garrett • 0

Thanks Peter!

Votes

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

Comment: DEXSeq DEXSeqDataSet count matrix duplication

Comment: Error in champ.load(): The following specified files do not exist

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