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Protein
•
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0
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459
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Database/tool that is able to tell me if the glutathionylation of a protein inhibits it?
protein
database
glutathionylation
PTM
2.8 years ago
Camelia
• 0
0
votes
1
reply
1.1k
views
Normalisation of protein micro array data using VSN
microarray
normalization
protein
updated 3.5 years ago by
Wolfgang Huber
★ 13k • written 4.9 years ago by
keniajin
• 0
2
votes
2
replies
1.2k
views
Can't display protein domain data from UCSC table unipDomain using Gviz
Gviz
protein
visualization
UcscTrack
protein domains
updated 3.6 years ago by
James W. MacDonald
65k • written 3.6 years ago by
paul.jaschke
▴ 10
1
vote
4
replies
889
views
package to analyze generic protein microarray data
microarray
protein
analysis
ProteomeProfiler
updated 4.1 years ago by
Gordon Smyth
50k • written 4.1 years ago by
hcnbox
• 0
0
votes
15
replies
2.5k
views
Is the STRINGdb server down?
STRINGdb
R
protein
updated 4.9 years ago by
zhanghongjie000
• 0 • written 5.1 years ago by
shahroze786
• 0
0
votes
1
reply
819
views
Annotating protein sequences
Protein
iranges
sequencing
5.1 years ago
ieuangw
• 0
0
votes
1
reply
982
views
Protein pathway analysis -- Classify, organize, and cluster a list of proteins / discovering relations between a set of proteins and linking them to …
protein
disease
pathway analysis
pathways
5.8 years ago
ረ
• 0
0
votes
1
reply
1.1k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
6.2 years ago
emadelhewihy
• 0
0
votes
0
replies
917
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
6.2 years ago
andres.susrud
• 0
2
votes
4
replies
1.3k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 7.2 years ago by
Michael Lawrence
★ 11k • written 7.2 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
2
replies
2.1k
views
Wrong protein sequence fetched with R's Biostrings readDNAStringSet function
biostrings
fasta
protein
updated 7.3 years ago by
James W. MacDonald
65k • written 7.3 years ago by
fastabest
• 0
1
vote
7
replies
2.2k
views
Can XCMS output continuum/profile data to netCDF format?
xcms
convert
protein
updated 7.4 years ago by
Johannes Rainer
★ 2.0k • written 7.4 years ago by
ray.bacala
• 0
0
votes
0
replies
1.2k
views
Job:
PhD Position in Bioinformatics
bioinformatics
protein
variantannotation
data integration
Job
7.4 years ago
stephan.pabinger
• 0
0
votes
5
replies
1.4k
views
Splitting a fasta file based on specific Amino acid for plotting
iranges
biostrings
fasta
protein
readaastringset
updated 7.5 years ago by
Michael Lawrence
★ 11k • written 7.5 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
1.7k
views
Producing alternate protein sequences from VCF
protein
vcf
9.0 years ago
dan.gatti
• 0
15 results • Page
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Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
shuwangxinze1996
• 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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