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Proteome
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167
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analysis of overexpressed proteins in metaproteomes
Proteomics
ProteoMM
ProteomicsWorkflow
Proteome
written 3 months ago by
ary.lech
▴ 10
2
votes
6
replies
707
views
Biostrings error at retrieving protein sequences
SequenceMatching
Biostrings
DifferentialExpression
Proteome
updated 5 months ago by
Hervé Pagès
16k • written 5 months ago by
nromerov
• 0
0
votes
1
reply
441
views
catagorization of proteins
Proteome
ProtGenerics
written 18 months ago by
bansalheena10
• 0
0
votes
0
replies
531
views
Outliers
Proteomics
Proteome
updated 18 months ago by
ATpoint
★ 4.0k • written 18 months ago by
bansalheena10
• 0
0
votes
0
replies
714
views
ProteoMM analysis with two replicates
shotgunproteomics
Proteome
proteomics
Proteomics
ProteoMM
2.0 years ago
ary.lech
▴ 10
1
vote
7
replies
3.0k
views
How can I convert the "Majority protein IDs" to "Gene names" (example below shown)?
MassSpectrometryData
Proteome
Database
DEP
3.0 years ago
tpm
• 0
1
vote
0
replies
1.4k
views
News:
Online training - Proteomics in R and Bioconductor
ProteomicsWorkflow
proteomics
Proteome
3.3 years ago
info
▴ 10
0
votes
1
reply
1.0k
views
R package to change protein *.msf file to any readable file
Proteome
ProteomicsWorkflow
proteomics
updated 3.3 years ago by
swbarnes2
★ 1.3k • written 3.3 years ago by
yueli7
▴ 20
0
votes
5
replies
2.3k
views
mRNA-seq cross-species analysis, is it possible?
Genetics
Normalization
Proteome
DESeq
Genetics
Normalization
Proteome
DESeq
updated 12.7 years ago by
Davis McCarthy
▴ 20 • written 12.7 years ago by
mali salmon
▴ 370
0
votes
0
replies
792
views
BSgenome data package of the human proteome: Does it exist?
Proteome
Proteome
14.5 years ago
Tillinghast, Guy, M.D.
▴ 30
0
votes
2
replies
1.6k
views
I: Two way anova or manova?
Proteome
Proteome
updated 16.7 years ago by
Mª José Nueda
▴ 90 • written 16.7 years ago by
simonegri@alice.it
▴ 20
11 results • Page
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Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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