Bioconductor Proteomics

Showing : Proteomics • reset

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2.9k

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differential expression proteomics

updated 8 months ago by ATpoint ★ 4.0k • written 6.3 years ago by cardin.julie • 0

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760

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Proteomics ProteoMM ProteomicsWorkflow

updated 9 months ago by mmvar • 0 • written 10 months ago by nkvnambiar • 0

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3.7k

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Proteomics NPX limma

updated 3 months ago by briankleiboeker • 0 • written 3.1 years ago by r.i.s.alnuwaysir ▴ 10

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707

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Proteomics proDA MultipleComparison

7 months ago t.b.n.nguyen-9 • 0

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587

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Proteomics RforProteomics ProteomicsWorkflow Spectra MassSpectrometryData

updated 9 months ago by Laurent Gatto 1.6k • written 9 months ago by mmvar • 0

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192

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Proteomics JobPosting SingleCell Spatial SpatialExperiment

7 weeks ago Peter Hickey ▴ 740

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189

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Proteomics ProteoMM ProteomicsWorkflow Proteome

written 4 months ago by ary.lech ▴ 10

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225

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Bioconductor Proteomics

5 months ago Joshua • 0

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1.7k

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Proteomics DEP limma

written 2.8 years ago by barrypraveen • 0

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1.4k

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RNAseq deseq2 proteomics transcriptomics workshop News

written 5.2 years ago by Laurent Gatto 1.6k

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2.2k

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mass spectrometry proteomics metabolomics Tutorial

written 3.5 years ago by Johannes Rainer ★ 2.0k

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715

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RforProteomics Proteomics ProteomicsWorkflow

updated 8 months ago by Laurent Gatto 1.6k • written 9 months ago by mmvar • 0

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440

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Proteomics DifferentialRegulation limma

7 months ago svlachavas ▴ 830

13 results • Page 1 of 1

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Answer: Citation for edgeR user guide by Gordon Smyth 50k

Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

You are just making up data? What is the point of this exercise?

Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k

What do you mean by 'the information'? Do you have things in particular that you want?

Comment: minfi::read.metharray.exp by clacarion • 0

I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…

Comment: minfi::read.metharray.exp by clacarion • 0

Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…

Votes

Answer: Citation for edgeR user guide

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

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