Bioconductor ProteomicsWorkflow

Showing : ProteomicsWorkflow • reset

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9.6k

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limma ProteomicsWorkflow

updated 16 months ago by Gordon Smyth 52k • written 3.2 years ago by David Lyon ▴ 340

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3.8k

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Proteomics ProteomicsWorkflow UniProt.ws

updated 4.0 years ago by James W. MacDonald 67k • written 4.0 years ago by Dario Strbenac ★ 1.5k

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1.8k

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ProteomicsWorkflow proteomics Proteome

4.1 years ago info ▴ 10

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Proteome ProteomicsWorkflow proteomics

updated 4.2 years ago by swbarnes2 ★ 1.4k • written 4.2 years ago by yueli7 ▴ 20

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Proteomics ProteoMM ProteomicsWorkflow

updated 18 months ago by mmvar • 0 • written 20 months ago by nkvnambiar • 0

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msqrob2 ProteomicsWorkflow proteomics

updated 2.6 years ago by Gordon Smyth 52k • written 2.7 years ago by Jane ▴ 10

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limma Proteomics ProteomicsWorkflow

updated 2.4 years ago by Gordon Smyth 52k • written 2.4 years ago by samantha.v.goncalves • 0

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RforProteomics Proteomics ProteomicsWorkflow

updated 17 months ago by Laurent Gatto 1.6k • written 18 months ago by mmvar • 0

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ProteomicsWorkflow proteomics proteinProfiles

updated 23 months ago by Laurent Gatto 1.6k • written 4.1 years ago by yueli7 ▴ 20

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999

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Proteomics RforProteomics ProteomicsWorkflow Spectra MassSpectrometryData

updated 18 months ago by Laurent Gatto 1.6k • written 18 months ago by mmvar • 0

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925

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proteinProfiles ProteomicsWorkflow ProteomicsAnnotationHubData Proteomics

updated 3.4 years ago by Gordon Smyth 52k • written 3.4 years ago by ALOK • 0

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587

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ProteomicsWorkflow PSMatch Spectra RforProteomics

updated 3 months ago by Laurent Gatto 1.6k • written 3 months ago by Jane_Huang • 0

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418

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Proteomics ProteoMM ProteomicsWorkflow Proteome

written 13 months ago by ary.lech ▴ 10

13 results • Page 1 of 1

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Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19) by ja.garcia • 0

It has been fixed by the Rbowtie2 maintainers in version 2.12.2. Thank you for the quick fix!

Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by Amora • 0

You did a great job giving an overview.....[slope][1] better than the bioconductor group! [1]: https://slopeio.org

Comment: contrast matrix design for a continuous variable by dtzhu337 • 0

Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…

Answer: SingleCellExperiment convenience function for metadata+expression? by Peter Hickey ▴ 750

Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…

Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by QN ▴ 10

Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…

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Answer: SingleCellExperiment convenience function for metadata+expression?

How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.

Answer: EdgeR Biological CVs

Answer: Error in download.file for TCGAutils::symbolsToRanges

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