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Pseudotime
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Reducing dataset size to improve run time for fitGAM in tradeSeq
tradeSeq
pseudotime
9 weeks ago
fluentin44
• 0
0
votes
1
reply
1.4k
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Pseudotime analysis on bulk RNASeq using monocle
pseudotime
monocle
dimensionality
3.1 years ago
pbachali
▴ 20
0
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2
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246
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how to plot a fitting line on the testPseudotime
Pseudotime
testPseudotime
TSCAN
SingleCell
OSCA
5 months ago • updated 4 months ago
Guandong Shang
▴ 40
3 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you for your help Dr. Michael. One more doubt, my original loci contains 7000 locus on different chromosomes. When i am generating …
Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
by
Robert Castelo
★ 3.0k
As James said, a `GAlignmentsList` object is the container for storing properly-paired, but with ambiguous pairing, alignments, and we're i…
Answer: Doubts about manipulation and annotation of microarray files deposited at GEO
by
James W. MacDonald
62k
Your first question is something that you will have to answer for yourself. There are any number of reasons that an array manufacturer will…
Comment: Splicing analysis with ASpli package gives an error when I use binGenome functio
by
Sophie
• 0
I was having a similar problem using the hg19 genome from UCSC. I tried many different ways of accessing the gtf and txdb object (i.e. down…
Comment: stat_compare_means function - Error 'must have same length'
by
Elif
• 0
Hello Basti, Thanks for suggesting this. I've tried it (I saw that in StackoverFlow I think), but it seems the value of the argument `test…
Votes
Convert SpatialExperiment Object to Seurat Object
Answer: Doubts about manipulation and annotation of microarray files deposited at GEO
Answer: Joining different datasets and analyzing using the group-specific condition effe
Answer: Joining different datasets and analyzing using the group-specific condition effe
A: Subclustering after MNN batch-correction
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