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Comment: Limma beta coefficient confidence intervals
by
fluentin44
•
0
Unfortunately that returns the confidence intervals for logFC, not the B statistic.
Comment: Alternative for wininet method in tximeta
by
uhlkatie
•
0
This worked perfectly. Thank you!
Answer: Limma beta coefficient confidence intervals
by
James W. MacDonald
60k
see ?topTable.
You can simply add confint = TRUE
Answer: Confused about the CPM and TMM normalization in edgeR
by
Gordon Smyth
45k
There's no such thing as TMM normalized counts, as the edgeR document tells you. This link might help: https://www.biostars.org/p/9475236/
Comment: batchelor correctExperiments() returns Error in eval(subscript, envir = eframe,
by
pcantalupo
•
0
It worked...thank you Aaron
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