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RSTUDIO
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reset
0
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13
replies
440
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GenomeInfoDbData had non-zero exit status
DESeq2
RStudio
GenomeInfoDbData
hadnon-zeroexitstatus
4 weeks ago • updated 28 days ago
JoseR
• 0
3
votes
4
replies
296
views
DESeq2::plotPCA plotting error
RStudio
PCA
DESeq2
updated 3 months ago by
swbarnes2
★ 1.1k • written 3 months ago by
960942
• 0
0
votes
0
replies
332
views
function GDCquery_Maf error
rstudio
maftools
4 months ago
misslubblys
• 0
8
votes
9
replies
1.1k
views
Where can I find EnsDb.Hsapiens.v105?
Ensembl
Rstudio
ensembldb
AnnotationHub
ensdb
updated 6 months ago by
Hervé Pagès
15k • written 6 months ago by
jon.klonowski
▴ 40
0
votes
3
replies
445
views
Reading large file (15GB) in R
R
Rstudio
Bioconducter
statistics
updated 5 months ago by
Sean Davis
21k • written 6 months ago by
nabiyogesh
▴ 10
0
votes
0
replies
177
views
Read the first sequence from fasta file - TFBSTool
TFBSTools
FASTA
RStudio
9 months ago
HELEN
• 0
0
votes
1
reply
231
views
TFBSTools and readFASTA
TFBSTools
DNASeqData
readFASTA
DNA
RStudio
updated 9 months ago by
James W. MacDonald
60k • written 9 months ago by
HELEN
• 0
0
votes
0
replies
196
views
TFBSTools- analysis for trascriprion factors
TFBSTools
RStudio
R
9 months ago
HELEN
• 0
1
vote
5
replies
713
views
DESeq2: All samples have 0 counts for all genes. check the counting script
DESeq2
RStudio
10 months ago
Sonia
• 0
0
votes
1
reply
1.2k
views
Unable to Install packages in R
rstudio
updated 11 months ago by
James W. MacDonald
60k • written 11 months ago by
Fiona
• 0
0
votes
4
replies
1.0k
views
transformation of csv file to fasta format with biostrings and r studio
DNASeq
rstudio
fasta
Biostrings
csv
11 months ago
HELEN
• 0
11 results • Page
1 of 1
Recent ...
Replies
Comment: DESeq2 LFC changes sign after adjusting for surrogates
by
Marie
• 0
Thanks a lot!
Comment: how to use Rsamtools to parse extra fields from STAR alignment
by
Jiping Wang
▴ 90
Thanks so much! That's exactly the solution I am looking for.
Comment: Mapping genome regions to gene symbols
by
michaelwegert
• 0
function > elementLengths() was deprecated in S4Vectors version update 0.16.0 (in 2016?). \ So I used: > elementNROWS() [https://web.m…
Comment: OPLS-DA: confidence interval for accuracy metric
by
etienne.thevenot
▴ 20
- The bootstrapping approach can be used to compute the CIs: see here for an example: Mendez et al. (2019). « A comparative evaluation …
Comment: Data input for aracne2regulon function in viper package
by
xlal
• 0
You are right!And may be we should check the gene symbols cause when I open the expression matrix in EXCEL,it will change some genes into m…
Votes
Answer: error running UniProt.ws
error running UniProt.ws
Comment: DEXSeq: Error in reading counts from htseq "Error in FUN(X[[i]], ...) : subscrip
how to use Rsamtools to parse extra fields from STAR alignment
Comment: how to use Rsamtools to parse extra fields from STAR alignment
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