Bioconductor RUV

Showing : RUV • reset

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1.3k

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RUV4 RUV Microarray

3.0 years ago Antonio • 0

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1.6k

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RUVSeq RUV RNA-seq

updated 3.6 years ago by James W. MacDonald 65k • written 3.6 years ago by karissa.barthelson ▴ 20

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1.6k

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RUV Nanostring RUV-III

updated 4.0 years ago by hermidalc ▴ 20 • written 4.7 years ago by raf4 ▴ 20

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949

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deseq2 RUV batch highly variable genes

updated 4.2 years ago by tmms • 0 • written 4.2 years ago by f_pardow • 0

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1.2k

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deseq2 ruv batch

updated 4.6 years ago by Michael Love 41k • written 4.6 years ago by r.tom • 0

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895

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missmethyl epic illuminahumanmethylationepicanno.ilm10b4.hg19. ruv

5.7 years ago peter.fransquet • 0

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885

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methylation missmethyl RUV batch effect

6.0 years ago RC • 0

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904

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missmethyl RUV control probes

6.0 years ago Taub, Margaret ▴ 10

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2.5k

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ruv ruvseq ruvnormalize single-cell zero-inflated

updated 6.7 years ago by davide risso ▴ 950 • written 6.7 years ago by Nik Tuzov ▴ 80

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2.2k

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RUV ruvseq ruvr ruvnormalize single cell

6.7 years ago Nik Tuzov ▴ 80

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908

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rnaseq ruv differential gene expression R

6.8 years ago manish20072013 • 0

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3.1k

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RUV single cell batch effect

7.1 years ago ribioinfo ▴ 100

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986

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ruv

7.1 years ago sasha • 0

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2.3k

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ruvseq ruvg ruv

updated 7.2 years ago by davide risso ▴ 950 • written 7.3 years ago by weiwsmiling • 0

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1.1k

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methylation gene expression sva batch effect ruv

7.3 years ago carleshf ▴ 10

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1.5k

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ruvseq RUV ruvnormalize ruvg

7.8 years ago anthonycolombo60 • 0

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2.2k

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ruvseq ruv microrna

8.8 years ago • updated 8.7 years ago sergio.espeso-gil • 0

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1.6k

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ruv microarray

updated 8.8 years ago by gthm ▴ 30 • written 8.9 years ago by Pauly Lin ▴ 150

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2.6k

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ruvseq ruv

updated 9.0 years ago by davide risso ▴ 950 • written 9.0 years ago by Pauly Lin ▴ 150

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2.6k

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RUV ruvseq rnaseq

9.0 years ago sergio.espeso-gil • 0

20 results • Page 1 of 1

Recent ...

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Comment: Different Shrunk Log2FC according with reference by Michael Love 41k

I took a look and the posterior width for these (fairly rare) examples overlaps zero. So the posterior when it disagrees is not narrow. An…

Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs by Guangchuang Yu ★ 1.2k

an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…

Comment: Different Shrunk Log2FC according with reference by andrebolerbarros ▴ 20

Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by ATpoint ★ 4.0k

The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…

Votes

Reproducibility issue with scran together with lapply and BiocParallel

C: SGSeq: moving toward diffex from SGSeq analysis

DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds

Subset DEXSeqDataSet In DEXSeq

How to get all possible comparisons in DiffBind

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