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News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
7 weeks ago • updated 22 hours ago
shepherl
3.8k
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69
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News:
Important Release 3.18 Freeze Announcment
Release
release
Bioconductor
Bioconducto
12 days ago
shepherl
3.8k
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News:
Bioconductor 3.19 Release Schedule
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release
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7 weeks ago • updated 29 days ago
shepherl
3.8k
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194
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Rcpp compilation error
Release
Rcpp
updated 6 weeks ago by
ATpoint
★ 4.0k • written 6 weeks ago by
Robert K. Bradley
▴ 40
0
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0
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194
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News:
Note about packages submitted for Bioconductor 3.19
Release
Submission
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Bioconductor
12 weeks ago
shepherl
3.8k
5
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419
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News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
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written 6 months ago by
shepherl
3.8k
1
vote
4
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534
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rnaSeqGene workflow not available in Bioconductor 3.18
rnaseqGene
Bioconductor3.18
DifferentialExpression
release
updated 5 months ago by
Michael Love
41k • written 5 months ago by
Nadine
▴ 60
0
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4
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698
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News:
Important Bioconductor Release 3.18 deadlines this week
Release
Devel
release
devel
updated 6 months ago by
Guido Hooiveld
★ 3.9k • written 6 months ago by
shepherl
3.8k
1
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364
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News:
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0
release
Annotation
7 months ago
kayla.interdonato
▴ 160
0
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401
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News:
Bioconductor 3.18 Release Schedule
Release
Software
release
7 months ago
shepherl
3.8k
1
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8
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1.5k
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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.1 years ago by
shepherl
3.8k
0
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News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
12 months ago
shepherl
3.8k
0
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2
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1.1k
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News:
Final List of Deprecated Packages for Bioc3.7
deprecate
package
release
News
written 6.1 years ago by
shepherl
3.8k
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Comment: get BM error
by
Fara
• 0
Thank you for your response. The primary reason for translating Ensembl IDs into Entrez Gene IDs is to perform KEGG (Kyoto Encyclopedia of…
Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
by
James W. MacDonald
65k
That's weird. I don't have any problem at all generating the `OrgDb` on my box. How big is the gene2pubmed.gz file? I get this: ``` gzip -…
Answer: get BM error
by
James W. MacDonald
65k
The genes you present are orthologous mappings from D. rerio to other teleost fishes, so it is probably going to be difficult to map to NCB…
Answer: How to retrieve gene ontology GO class from gene list?
by
James W. MacDonald
65k
You can also use a combination of the `org.Hs.eg.db` and `GO.db` packages. ``` > library(GO.db) > library(org.Hs.eg.db) > go <- m…
Comment: Different Shrunk Log2FC according with reference
by
Michael Love
41k
I took a look and the posterior width for these (fairly rare) examples overlaps zero. So the posterior when it disagrees is not narrow. An…
Votes
Answer: get BM error
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
Comment: Different Shrunk Log2FC according with reference
Reproducibility issue with scran together with lapply and BiocParallel
C: SGSeq: moving toward diffex from SGSeq analysis
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