Bioconductor Repitools

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Alignment convert Repitools Alignment convert Repitools

updated 4 months ago by Marge • 0 • written 11.3 years ago by José Luis Lavín ▴ 280

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GO Repitools GO Repitools

updated 10.4 years ago by Dario Strbenac ★ 1.5k • written 10.4 years ago by Tim Smith ★ 1.1k

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repitools promoter tss annotation

6.1 years ago Ryan C. Thompson ★ 7.9k

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

updated 12.5 years ago by Chao-Jen Wong ▴ 580 • written 12.5 years ago by Guest User ★ 13k

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repitools bioconductor cpgDensityCalc

7.0 years ago divyswar01 • 0

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

10.2 years ago Jaritz,Markus ▴ 20

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BSgenome BSgenome Repitools BSgenome BSgenome Repitools

10.1 years ago Dario Strbenac ★ 1.5k

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limma Repitools limma Repitools

11.1 years ago Guest User ★ 13k

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879

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Baymeth methylation MBD-seq Repitools

7.9 years ago pm2015 • 0

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878

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repitools

8.7 years ago Matthias Lienhard ▴ 240

10 results • Page 1 of 1

Recent ...

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Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Michael Love 41k

I don't really have any additional suggestion here.

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Dear Michael, I tried all three ways (the orIginal, increasing the number of required samples,and subsetting (the countdata and metadata be…

Comment: DESeq2 - dispersion estimation when there is none by Michael Love 41k

The red line does assume that shape but the fact the black points show that pattern is discussed in the 2014 paper. > Some caution is warr…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 65k

I don't really follow what you are saying. All you have to do is delete the NCBI.sqlite db and *re-run the script exactly as you did above.…

Comment: Methylation Analysis experiment design using Limma by hortense96 • 0

Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…

Votes

Comment: DESeq2 - dispersion estimation when there is none

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa

Answer: OrgDb for maize

Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Awards • All

Scholar to Michael Love 41k