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RforProteomics
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6
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1.7k
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Protein quantification by MSnbase package
msnbase
rforproteomics
5.1 years ago
fgol
▴ 10
0
votes
5
replies
3.6k
views
Errors installing RforProteomics and MSnbase packages
RforProteomics
MSnbase
updated 5.2 years ago by
Laurent Gatto
1.6k • written 5.2 years ago by
fgol
▴ 10
0
votes
5
replies
674
views
R for Mass Spectrometry: PSMatch package won't read .mzid file exported from ProteinPilot?
RforProteomics
Proteomics
ProteomicsWorkflow
updated 8 months ago by
Laurent Gatto
1.6k • written 8 months ago by
mmvar
• 0
2
votes
4
replies
1.4k
views
calling combineFeatures twice causes duplicate row.names
msnbase
duplicate
rforproteomics
updated 6.2 years ago by
Laurent Gatto
1.6k • written 6.2 years ago by
joris.vanhoutven
▴ 10
1
vote
3
replies
1.3k
views
Running GO analysis via Prostar
prostar
proteomics
rforproteomics
annotationforge
updated 5.8 years ago by
Samuel Wieczorek
▴ 10 • written 5.8 years ago by
lolli.langan
▴ 20
3
votes
2
replies
1.5k
views
DEP: Grouping Samples for missing value imputation
DEP
missing value imputation
proteomics
rforproteomics
6.3 years ago • updated 6.1 years ago
alex.gos90
▴ 10
0
votes
2
replies
858
views
normalize the SILAC light heavy value
RforProteomics
3.4 years ago
yueli7
▴ 20
0
votes
1
reply
1.0k
views
Installation of package RforProteomics had non-zero exit status? ERROR lazy loading failed for package 'RforProteomics'
RforProteomics
updated 4.4 years ago by
James W. MacDonald
65k • written 4.4 years ago by
jb3082
• 0
0
votes
1
reply
1.5k
views
Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.1 years ago by
Laurent Gatto
1.6k • written 8.1 years ago by
sarahgrogan
• 0
2
votes
1
reply
917
views
Maximum parsimony protein assembly/inference
rforproteomics
proteomics
msnid
msnbase
4.0 years ago
daniel.magnus.bader
▴ 40
1
vote
1
reply
936
views
Errors in installing RforProteomics package
error
RforProteomics
Install
updated 3.3 years ago by
Mike Smith
★ 6.5k • written 3.3 years ago by
Phoebe
• 0
0
votes
1
reply
526
views
R for Mass Spectrometry: Precursor Scan Number lost when converting .wiff to .mzML?
Proteomics
RforProteomics
ProteomicsWorkflow
Spectra
MassSpectrometryData
updated 8 months ago by
Laurent Gatto
1.6k • written 8 months ago by
mmvar
• 0
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Michael Love
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May be documented by the software you are using? https://github.com/lpantano/DEGreport
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Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
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Comment: miRTarRnaseq library
by
mercedeh.movassagh
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Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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transcript name mapping between human and mouse
transcript name mapping between human and mouse
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Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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