Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Rhtslib
•
reset
0
votes
0
replies
602
views
Error with Rhtslib
Rhts
Rhtslib
3.1 years ago
anand_mt
▴ 90
0
votes
6
replies
7.9k
views
Rhtslib - install error
Rhtslib
installation
error
zlib
updated 4.6 years ago by
leoadam014
• 0 • written 5.5 years ago by
boboshaq
• 0
1
vote
6
replies
1.9k
views
Error on Rhtslib package installation
software error
Rhtslib
zlib.h
updated 4.6 years ago by
Hervé Pagès
16k • written 4.6 years ago by
juandenciso14
• 0
5
votes
5
replies
2.2k
views
Is BiocInstaller::biocLite incompatible with withr::with_makevars?
biocLite
package installation
withr
biocinstaller
rhtslib
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
merv
▴ 120
3
votes
3
replies
1.9k
views
Rhtslib fails to find liblzma.dylib on Mac OSX
Rhtslib
updated 5.9 years ago by
Hervé Pagès
16k • written 5.9 years ago by
Aaron Lun
★ 28k
0
votes
3
replies
1.3k
views
csaw intallation issue: cannot find "lib" in Rhtslib installation
diffhic
csaw
Rhtslib
updated 6.5 years ago by
Martin Morgan
25k • written 6.5 years ago by
favorov
• 0
4
votes
7
replies
1.9k
views
Does Rhtslib currently work on Windows?
Rhtslib
htslib
package
updated 6.7 years ago by
Martin Morgan
25k • written 6.7 years ago by
Shian Su
▴ 40
7 results • Page
1 of 1
Recent ...
Replies
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
Both `RUVseq` and `sva` are meant to be used to remove technical variability. The problem is the identification of variability that is tech…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
• 0
Hello James, Thank you very much for your answer and taking the time to read my post. I understand your remark, but isn't the approach o…
Comment: PCA plot suggestions
by
JKim
• 0
cross post: https://www.biostars.org/p/9593486/
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
You cannot correct for technical variability due to batch if samples are nested in batch. The technical and biological differences are comp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
James W. MacDonald
65k
You will need to show some reproducible code for anybody to track this down. Please note that `DESeq2` has been used by thousands of people…
Votes
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Awards
• All
Scholar
to
James W. MacDonald
65k
Supporter
to
JKim
• 0
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Chris
• 0
Supporter
to
Jonathan
▴ 10
Locations
• All
United States,
2 minutes ago
Canada,
4 minutes ago
France,
7 minutes ago
France,
7 minutes ago
Germany,
9 minutes ago
Traffic: 1104 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6