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RnaSeqSampleSize
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1
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417
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RNASeq time course analysis, missing time points for control
RNASeqData
RnaSeqSampleSize
RNASeq
RNASeqPower
4 months ago
drewhaydensteele
• 0
0
votes
1
reply
393
views
Sample size estimation for RNAseq experiment with more than 2 conditions
SSPA
ssizeRNA
RnaSeqSampleSize
updated 7 months ago by
James W. MacDonald
65k • written 7 months ago by
Megan
• 0
0
votes
1
reply
388
views
Comparing RNASeq data from multiple studies
RNASeqData
RnaSeqSampleSize
RNASeqPower
RNASeq
updated 6 months ago by
Basti
▴ 770 • written 6 months ago by
Luke
• 0
1
vote
1
reply
248
views
Minimum datasets needed for meta analysis
RnaSeqSampleSize
updated 5 months ago by
Basti
▴ 770 • written 5 months ago by
Durga
▴ 10
3
votes
1
reply
261
views
Dataset imbalance
RNASeq
DifferentialExpression
RnaSeqSampleSizeData
RnaSeqSampleSize
updated 3 months ago by
Gordon Smyth
50k • written 3 months ago by
Shaimaa Gamal
• 0
0
votes
1
reply
319
views
Interaction terms in DESeq2
RNASeqData
RnaSeqSampleSize
DESeq2
updated 4 months ago by
James W. MacDonald
65k • written 4 months ago by
Mimi
• 0
0
votes
1
reply
219
views
Conversion of .sf to .rgel format for the salmon processed files with transcript to gene mapping.
RnaSeqSampleSize
updated 3 months ago by
ATpoint
★ 4.0k • written 3 months ago by
Anudev
• 0
7 results • Page
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Recent ...
Replies
Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
I'm new here, but its better now?
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
That did NOT really improve things...... Likely I wasn't clear enough, but with R-code I meant both the command you typed, as well as the o…
Comment: Trying to use enrichGO
by
fernanda.backsouza
• 0
Thank you for yout time guido, 1) When the pvalueCutoff = 1 nothing change. 2) output from > `str(ortologos_filtrados) data.frame':…
Answer: Cannabis OrgDb
by
Guido Hooiveld
★ 3.9k
> library(AnnotationHub) > hub <- AnnotationHub() snapshotDate(): 2023-10-23 > query(hub, c("cannabis","orgdb") ) …
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
To increase readability: could you please reformat your post? Select the R--code, and click the `CODE` button... the 5th button.
Votes
Answer: Cannabis OrgDb
DESeq2: How to find out how well the model fits the data?
Comment: DESeq2 - dispersion estimation when there is none
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
Answer: OrgDb for maize
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