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Bioconductor core team
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bioconductor
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9.5 years ago
Martin Morgan
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Bioinformatics Analyst II, Genomics Shared Resource (Fred Hutchinson Cancer Research Center Seattle, WA)
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bioinformatics
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4.9 years ago
Fred Hutch (Recruiting)
▴ 40
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Job:
Post-Doctoral Research Fellow, Cancer Genomics (Fred Hutch - Seattle, WA)
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4.9 years ago
Fred Hutch (Recruiting)
▴ 40
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Job:
Bioinformatics Analyst II, Genomics Shared Resource (Seattle, WA)
GENOMICS
BIOINFORMATICS
SEATTLE
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4.7 years ago
Fred Hutch (Recruiting)
▴ 40
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883
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Job:
Bioinformatics Analyst I-II, Prostate Cancer Program - Fred Hutch (Seattle, WA)
Bioinformatics
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4.6 years ago
Fred Hutch (Recruiting)
▴ 40
1
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920
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Job:
Bioinformatics Analyst II, Genomics Shared Resource - Fred Hutchinson Cancer Research Center, Seattle, WA
bioinformatics
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genomics
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4.5 years ago
Fred Hutch (Recruiting)
▴ 40
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879
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Job:
Bioinformatics Analyst I-II - Fred Hutchinson Cancer Research Center (Seattle, WA)
SEATTLE
WASHINGTON STATE
WASHINGTON
BIOINFORMATICS
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4.1 years ago
Fred Hutch (Recruiting)
▴ 40
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783
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Job:
Bioinformatician-Cancer Biology - Fred Hutchinson Cancer Research Center (Seattle, WA)
SEATTLE
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WASHINGTON STATE
BIOINFORMATICS
COMPUTATIONAL BIOLOGY
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4.1 years ago
Fred Hutch (Recruiting)
▴ 40
1
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823
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Job:
Post-Doctoral Research Fellow, Biostatistics - Seattle, WA
BIOSTATISTICS
SEATTLE
WASHINGTON
COMPUTATIONAL BIOLOGY
Job
3.9 years ago
Fred Hutch (Recruiting)
▴ 40
1
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878
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Job:
Post-Doctoral Research Fellow, Cancer Genomics
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bioinformatics
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3.9 years ago
Fred Hutch (Recruiting)
▴ 40
10 results • Page
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Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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