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SNAData
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Database for exploring annotations of the coding genome at variants, such as candidate regulatory SNPs at disease-associated loci.
SNP
ExomeSeqData
snapcount
SNAData
SNPRelate
4 months ago
m610110001
• 0
0
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1.1k
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Bug report: Help pages for degree (package graph) not displayed
Cancer
graph
SNAData
Cancer
graph
SNAData
updated 14.9 years ago by
Patrick Aboyoun
1.6k • written 14.9 years ago by
Martin Morgan
25k
0
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691
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Bug report: Help pages for degree (package graph) not displayed
graph
SNAData
graph
SNAData
14.9 years ago
Zembower, Kevin
▴ 50
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Answer: MSA package fails to be installed - installation of package ‘msa’ had non-zero
by
stitam
• 0
Hi, I came across the same issue when trying to install `msa` in a docker (singularity) container. My base image was `debian:bullseye-20230…
Comment: deseq2 nested multifactorial analysis
by
Basti
▴ 700
The information on genotype is included in the condition : all Control_1 are A, all Control_2 are B The condition variable is sufficient to…
Comment: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R
by
Yang Shi
▴ 10
Thanks for your reply sir!
Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
by
Rory Stark
★ 4.6k
`dba.count()` counts reads overlapping consensus regions. After that, the original peak scores are ignored. All quantitative analysis (via …
Comment: Time-course, comparison of two groups
by
boczniak767
▴ 720
I'd like to test: 1. Are there differences between treatment (cold vs regrowth) time profiles for each line? 2. Do lines react differentl…
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Answer: How to deal with the negative values from EBPlusPlusAdjustPANCAN_IlluminaHiSeq_R
Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
A: Pathway analysis of differentially methylated CpGs
Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
Comment: TxDB.Hsapiens.UCSC.hg38.knownGene with locateVariants() identifying SNPs from va
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