Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
SVD
•
reset
4
votes
5
replies
2.7k
views
SVA and proportion of variance explained
sva
svd
explained variance
pca
updated 7.5 years ago by
Jeff Leek
▴ 650 • written 7.5 years ago by
Mattia
▴ 10
0
votes
2
replies
1.6k
views
Some terms in EPIC Methylation Analysis
ChAMP
SVD
Array
Slide
Sample Plate
updated 5.5 years ago by
Yuan Tian
▴ 270 • written 5.5 years ago by
yuabrahamliu
• 0
0
votes
2
replies
729
views
error in champ.SVD
svd
methylation
champ
updated 12 months ago by
shepherl
3.8k • written 12 months ago by
Giulia
• 0
0
votes
1
reply
1.9k
views
News:
Bug in ChAMP package champ.SVD() function
champ
methylation
450k
SVD
EPIC
News
7.6 years ago
Yuan Tian
▴ 90
0
votes
0
replies
351
views
Distance between columns vs distance between rows and SVD
distance
svd
14 months ago
Lenny186
• 0
5 results • Page
1 of 1
Recent ...
Replies
Comment: Which input file is used for DGEList in EgdeR?
by
i.atanasoai
• 0
Understood, Thank you very much for the reply, very kind.
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?" No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences. It…
Comment: DESeq filtering specific to contrasts
by
Michael Love
41k
If the counts are too low it in one group then you can't make the comparison either way (whether they are filtered out or just under-powere…
Votes
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Awards
• All
Popular Question
to
shepherl
3.8k
Popular Question
to
BioinfGuru
▴ 20
Popular Question
to
Gordon Smyth
50k
Scholar
to
Peter Hickey
▴ 740
Popular Question
to
sropri
• 0
Locations
• All
Ireland,
just now
Sweden,
just now
Netherlands,
1 minute ago
Germany,
2 minutes ago
France,
8 minutes ago
Traffic: 728 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6