Bioconductor Scrna

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2.2k

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DropletUtils emptyDrops scRNA scRNAseq 10x

20 months ago Peter Hickey ▴ 700

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1.0k

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scRNAseq scrna paireddesign edgeR pseudobulking

updated 8 months ago by Gordon Smyth 50k • written 8 months ago by garcia • 0

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2.2k

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DESeq2 Scrna scRNAseq

2.7 years ago RDoc ▴ 10

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4.2k

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MAST scRNA GSEA

updated 6.7 years ago by Andrew_McDavid ▴ 270 • written 6.7 years ago by siajunren • 0

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981

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scRNAseq scRNA batchelor BatchEffect

updated 3.4 years ago by Aaron Lun ★ 28k • written 3.4 years ago by Adrien • 0

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1.5k

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scrna scrnaseq differential gene expression

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by d.depledge • 0

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1.7k

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scRNA zinbwave batch IntegratedData

updated 3.6 years ago by davide risso ▴ 950 • written 3.6 years ago by Assa Yeroslaviz ★ 1.5k

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1.5k

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scater scrna

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by hrishi27n ▴ 20

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723

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scRNAseq quickcluster scRNA scran

4 months ago ruba-mahmoud • 0

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628

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scran Normalization scRNA BatchEffect

15 months ago r_grau ▴ 10

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886

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SCRNA

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by sumetha • 0

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656

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scrna scRNAseq

updated 5 months ago by Gabriella • 0 • written 13 months ago by sarah.jobbins • 0

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392

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scRNA scRNAseq

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by Omer • 0

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1.7k

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Seurat scRNA debugging exceptions unit-test

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by moldach ▴ 20

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4.6k

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scRNA monocle packages Tutorial

4.6 years ago 444579004 • 0

15 results • Page 1 of 1

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Answer: List of Deprecated Packages for Bioc3.18 by shepherl 3.8k

previously unannounced, COHCAP is not deprecated but removed with release 3.19. see [mailing list discussion](https://stat.ethz.ch/piperm…

Answer: SNP locus package for mouse? by James W. MacDonald 65k

There isn't (IIRC) an official way to do this, but [Herve has a GitHub][1] with a package that you could use if you are willing to put in t…

Answer: flowStats Search Error by James W. MacDonald 65k

A better approach is to click on the Packages header on the main site, then search on that page for flowStats, rather than searching the en…

Comment: geneList error in clusterprofiler by Ana • 0

Ahh thank you, that fixed it!

Answer: geneList error in clusterprofiler by Basti ▴ 760

Have a look at the documentation : https://www.rdocumentation.org/packages/clusterProfiler/versions/3.0.4/topics/gseGO geneList argument s…

Votes

Answer: geneList error in clusterprofiler

Comment: Memory errors using read.bismark?

Comment: Not fully paired differential gene expression analysis

Comment: [DiffBind] Obtaining normalization factors

Answer: ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with var

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