Showing : Software • reset
0
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7
replies
603
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News: List of Deprecated Packages for Bioc3.19
Release Devel ExperimentData Software
7 weeks ago • updated 5 hours ago shepherl 3.8k
0
votes
1
reply
235
views
News: Bioconductor 3.19 Release Schedule
Release release Software
7 weeks ago • updated 28 days ago shepherl 3.8k
5
votes
1
reply
419
views
News: Bioconductor 3.18 is Released!
Packages Bioconductor Release Software
written 6 months ago by 3.8k
2
votes
1
reply
981
views
Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq microbiome Software
updated 7 months ago by ★ 4.0k • written 7 months ago by ▴ 10
0
votes
0
replies
399
views
News: Bioconductor 3.18 Release Schedule
Release Software release
7 months ago shepherl 3.8k
0
votes
1
reply
403
views
Generate false reads for testing
mgu74bv2cdf Software Alignment
updated 10 months ago by 65k • written 10 months ago by • 0
1
vote
8
replies
1.5k
views
News: Final List of Deprecated Package Bioc 3.9
deprecation release software experimentData News
written 5.1 years ago by 3.8k
0
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0
replies
582
views
News: Bioconductor 3.17 is Released!
Packages Release Bioconductor Software
12 months ago shepherl 3.8k
3
votes
6
replies
1.1k
views
News: Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software Bioconductor Devel devel
updated 13 months ago by • 0 • written 13 months ago by 3.8k
0
votes
0
replies
545
views
News: Bioconductor 3.17 Release Schedule
Softwar Release Bioconductor release Software
13 months ago shepherl 3.8k
0
votes
0
replies
755
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
17 months ago Robert Castelo ★ 3.3k
1
vote
0
replies
783
views
News: Bioconductor 3.16 is Released!
Release Packages Bioconductor Software
17 months ago shepherl 3.8k
0
votes
0
replies
705
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release Devel Bioconductor Software
18 months ago shepherl 3.8k
8
votes
0
replies
843
views
News: Bioconductor 3.15 is Released!
Software Release Packages Bioconductor
24 months ago • updated 23 months ago shepherl 3.8k
0
votes
5
replies
1.3k
views
News: Final List of Deprecated Packages for Bioc3.14
ExperimentData Deprecation Software Release Workflow
2.5 years ago • updated 2.0 years ago shepherl 3.8k
0
votes
0
replies
606
views
News: New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release Software Bioconductor Devel
2.1 years ago shepherl 3.8k
8
votes
0
replies
880
views
News: Bioconductor 3.14 is Released!
release Packages Software Release Bioconductor
2.5 years ago shepherl 3.8k
0
votes
0
replies
845
views
Job: Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data immunology software vaccinology
2.6 years ago Daniel • 0
5
votes
0
replies
1.0k
views
News: Bioconductor 3.13 is Released!
Release Bioconductor Packages Software
2.9 years ago shepherl 3.8k
2
votes
2
replies
1.5k
views
News: Final List of Deprecated Packages for Bioc3.13
Workflow Software ExperimentData Deprecation
3.4 years ago • updated 3.0 years ago shepherl 3.8k
4
votes
0
replies
931
views
News: Bioconductor 3.12 is Released!
Software release Bioconductor Packages Release
3.5 years ago shepherl 3.8k
1
vote
2
replies
1.4k
views
News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
3.5 years ago shepherl 3.8k
0
votes
0
replies
1.1k
views
Job: R programmer position in genetic epidemiology/bioconductor
genetics genomics software Job
3.5 years ago Vincent J. Carey, Jr. 6.7k
2
votes
4
replies
1.2k
views
Bioconductor package development
package R software development
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
3
votes
0
replies
1.4k
views
News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
3.6 years ago shepherl 3.8k
0
votes
2
replies
780
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software annotation experiment workflow
updated 3.7 years ago by 3.8k • written 3.7 years ago by • 0
0
votes
0
replies
809
views
News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
3.9 years ago shepherl 3.8k
0
votes
2
replies
805
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation software TxDb
updated 3.9 years ago by 65k • written 3.9 years ago by • 0
0
votes
3
replies
1.0k
views
News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 4.0 years ago by ▴ 160 • written 4.1 years ago by 3.8k
4
votes
0
replies
802
views
News: Bioconductor 3.11 is Released!
software bioconductor release packages News
4.0 years ago shepherl 3.8k
0
votes
0
replies
765
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.2 years ago shepherl 3.8k
0
votes
1
reply
845
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.3 years ago shepherl 3.8k
1
vote
1
reply
1.1k
views
How to use ENCprime via coRdon with a custom background sequence set?
software codon usage bias dna
updated 4.4 years ago by ▴ 10 • written 4.4 years ago by ▴ 40
0
votes
0
replies
870
views
News: List of Deprecated Packages Bioc 3.11
annotation experimentdata software release deprecation News
4.4 years ago shepherl 3.8k
0
votes
2
replies
1.6k
views
News: Final List of Deprecated Packages for Bioc3.10
annotation experimentdata deprecation release software News
4.5 years ago • updated 4.4 years ago shepherl 3.8k
2
votes
2
replies
1.0k
views
News: Bioconductor Devel 3.11 Notification
software bioconductor packages reports News
4.5 years ago shepherl 3.8k
6
votes
0
replies
845
views
News: Bioconductor 3.10 is released!!
release software packages bioconductor News
4.5 years ago shepherl 3.8k
0
votes
0
replies
843
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.6 years ago shepherl 3.8k
2
votes
0
replies
2.3k
views
Job: Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics genomics transcriptomics software Job
4.6 years ago Laurent Gatto 1.6k
0
votes
1
reply
1.0k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software deprecation release News
4.7 years ago • updated 4.6 years ago shepherl 3.8k
0
votes
0
replies
738
views
Job: Software Developer - BC Cancer Research Center, Vancouver BC
software bioinformatics sequecing Job
4.9 years ago jmaanaki • 0
0
votes
3
replies
1.1k
views
News: List of Deprecated Packages Bioc 3.10
annotation experimentdata software release deprecation News
4.9 years ago shepherl 3.8k
0
votes
1
reply
856
views
News: Initial List of Deprecated Packages Bioc 3.10
software experimentdata release deprecation annotation News
5.0 years ago • updated 4.9 years ago shepherl 3.8k
0
votes
1
reply
1.2k
views
News: List of Deprecated Package Bioc 3.9
deprecate release devel software experimentdata News
5.2 years ago shepherl 3.8k
0
votes
1
reply
1.1k
views
Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.3 years ago by 65k • written 5.3 years ago by • 0
0
votes
1
reply
1.1k
views
News: List of Deprecated Package Bioc 3.9
deprecate release software devel News
5.3 years ago shepherl 3.8k
0
votes
0
replies
1.1k
views
News: DEADLINE: All packages to pass R CMD build and R CMD check
release software experimentdata workflows News
6.0 years ago shepherl 3.8k
0
votes
8
replies
2.1k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation software software error
updated 7.8 years ago by ★ 4.3k • written 7.9 years ago by ▴ 10
1
vote
3
replies
1.6k
views
Are there any bioconductor github mirrors for data packages?
software bioc-devel developers R
updated 8.5 years ago by ★ 8.2k • written 8.5 years ago by • 0
2
votes
3
replies
2.8k
views
package for sex determination using sam/bam files
software sex package
8.5 years ago Pau Marc Muñoz Torres ▴ 20
50 results • Page 1 of 1
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Answer: Citation for edgeR user guide by Gordon Smyth 50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k
What do you mean by 'the information'? Do you have things in particular that you want?
Comment: minfi::read.metharray.exp by clacarion • 0
I think its work with `read.metharray.sheet` ```r > sheet <- read.metharray.sheet("/Users/clarachretienneau/Desktop/clock_epigenetic/PJ120…
Comment: minfi::read.metharray.exp by clacarion • 0
Thank you for your response Basti ! I add all the idat files in a unique folder called "idat" and add it in my path ```r > list.files("…
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Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
Answer: Cannabis OrgDb
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