updated 2.3 years ago by
Miguel
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written 4.9 years ago by
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updated 20 months ago by
maria.soler
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written 3.0 years ago by
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Clarification of what DESeq2::estimateSizeFactors controlGenes does and when it should *not* be used
updated 3.0 years ago by
ATpoint
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written 3.0 years ago by
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written 17 months ago by
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4.4 years ago
mb1996
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21 months ago
Virangika
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Recent ...
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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
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My apologies, I forgot that `design.group` is not included in the final matrix, because the baseline group effects are already captured by …
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It sounds like your mzML conversion has a CV term that XCMS doesn t recognize, which often happens with newer vendor formats or outdated ms…
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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
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chp265
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Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…
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