Bioconductor StructuralVariantAnnotation

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StructuralVariantAnnotation

updated 24 months ago by Daniel Cameron ▴ 40 • written 2.0 years ago by Dario Strbenac ★ 1.5k

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StructuralVariantAnnotation

updated 4.5 years ago by Daniel Cameron ▴ 40 • written 4.6 years ago by Dario Strbenac ★ 1.5k

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Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by russ.bainer ▴ 10

Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…

Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0

Hi Robert, If I don't want to use all pathway in c2 gene set but only a few pathways of interested, how can I do that? So we try to get a …

Comment: How to retrieve detailed regression results from deseq2 by Weiqian ▴ 10

Hi Michael, thanks for the answer! I'll have a look : )

Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

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A: Docker container with bioconductor and devtools

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