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News:
New Package Submission Deadline for Bioc Release 3.14
newpackage
Deadline
Release
Submission
8 months ago
shepherl
3.1k
0
votes
3
replies
380
views
News:
New Package Submission Workflow Updates!
new packages
submission
bioconductor
News
updated 10 months ago by
jonathan.dekermanjian
• 0 • written 22 months ago by
shepherl
3.1k
0
votes
2
replies
314
views
Confusion error from automated checks for package submission
package
submiss
Submission
updated 12 months ago by
Hervé Pagès
15k • written 12 months ago by
sara.stankiewicz
• 0
1
vote
1
reply
313
views
Recommended logging/logger for bioconductor package submission.
Submission
updated 12 months ago by
Lluís Revilla Sancho
▴ 660 • written 12 months ago by
MatthaeusCaesar
• 0
0
votes
1
reply
411
views
News:
Bioconductor 3.13 New Package Submission Deadline
release
Submission
newpackage
Release
Deadline
13 months ago
shepherl
3.1k
1
vote
0
replies
461
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
20 months ago
shepherl
3.1k
2
votes
2
replies
336
views
Does the 10 minute CMD check time limit include unit testing?
new package
submission
2.4 years ago
Krutik Patel
▴ 10
0
votes
0
replies
253
views
News:
Single Package Builder for New Package Submissions
new package
submission
release
News
2.5 years ago
shepherl
3.1k
1
vote
1
reply
246
views
Is ECIS Data within BioConductor's remit?
Submission
ECIS
Bioconductor Scope
updated 2.7 years ago by
Martin Morgan
25k • written 2.7 years ago by
jhuc964
▴ 10
0
votes
1
reply
835
views
How to submit a package hosted on Bitbucket
package
submission
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
richierocks
▴ 40
1
vote
0
replies
3.6k
views
News:
New Package Submission Process
submission
News
5.9 years ago
Dan Tenenbaum
★ 8.2k
7
votes
6
replies
1.4k
views
Help to find Volunteer who can review my bioconductor package before submission ?
r packages
submission
6.3 years ago
Jurat Shahidin
▴ 70
13
votes
1
reply
2.3k
views
News:
Updated Bioconductor Package Submission Policy
package
submission
News
6.4 years ago
Martin Morgan
25k
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Answer: Using featureCounts and downloading Rsubread
by
James W. MacDonald
59k
You need to tell `BiocManager;;install` that you want to install the `Rsubread` package. ``` BiocManager::install("Rsubread") library(…
Comment: featureCounts: 0% successfully assigned fragments
by
KMS
• 0
Dear ATpoint I am exactly looking for read/gene count from BAM/SAM file either through ht-seq or feature count feature count giving me 0% s…
Answer: Get MANE transcripts from TxDb.Hsapiens.UCSC.hg38.knownGene
by
James W. MacDonald
59k
There is the ncbiRefSeqSelect table that has the MANE and RefSeq Select transcripts. It's not just the MANE though. ``` > z <- makeTxDb…
Comment: Handling of missing values in limma
by
AyHi
• 0
Thank you, Gordon, for your reply. I used sum(is.na(lmfit)) after lmFit, but somewhat it indicated there was no NA observations even when…
Comment: merging VCF files
by
lesefo6448
• 0
You can use this VCF Merger Software if you want to Merge VCF files into one file. this Software easily Merge your multiple VCF files with…
Votes
Answer: Load packages when using BatchtoolsParam
Comment: Load packages when using BatchtoolsParam
Answer: edgeR: the F-statistics changed after removing lowly expressed gene
Answer: edgeR: the F-statistics changed after removing lowly expressed gene
A: DESeq2: thousands of NA for pvalues?
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