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Showing :
Subsetting
•
reset
4
votes
2
replies
1.5k
views
drop levels in eSet pData
subsetting
eSet
8.1 years ago
Shamim Sarhadi
▴ 20
1
vote
2
replies
955
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.6 years ago
Fabian Grammes
▴ 20
4
votes
4
replies
1.6k
views
Limma Elist subsetting
microarray
limma
subsetting
7.9 years ago
arfranco
▴ 130
1
vote
2
replies
1.4k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
18 months ago • updated 17 months ago
Duy Duc
• 0
3
votes
7
replies
6.6k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.8 years ago by
Gordon Smyth
50k • written 7.8 years ago by
mnaymik
▴ 10
0
votes
1
reply
2.0k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
bri.isabella
• 0
0
votes
5
replies
2.5k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
2.8 years ago
rtrivedi1
▴ 10
3
votes
2
replies
1.3k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
arado1
• 0
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.6 years ago by
Jiang, Mike
★ 1.3k • written 8.6 years ago by
peterfoster
▴ 20
1
vote
2
replies
2.0k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
mdeea123
▴ 10
0
votes
1
reply
1.2k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 7.2 years ago by
henrik.seidel
▴ 40 • written 7.4 years ago by
Guido Hooiveld
★ 3.9k
0
votes
2
replies
1.2k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 5.3 years ago by
Hervé Pagès
16k • written 5.3 years ago by
felix.ernst
• 0
2
votes
1
reply
1.2k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 8.8 years ago by
laurent.jacob
▴ 10 • written 8.9 years ago by
Dario Strbenac
★ 1.5k
3
votes
4
replies
6.1k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.5 years ago
jhanks1981
• 0
1
vote
2
replies
1.3k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.5 years ago by
Axel Klenk
★ 1.0k • written 6.5 years ago by
A
▴ 40
2
votes
5
replies
1.7k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.9 years ago by
Michael Love
41k • written 5.9 years ago by
giulia.pasquesi
▴ 10
1
vote
1
reply
964
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.7 years ago by
James W. MacDonald
65k • written 5.7 years ago by
lalchungnungabt17
• 0
4
votes
7
replies
4.4k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
TJ
• 0
4
votes
3
replies
3.8k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.6 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
924
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
smajor
• 0
20 results • Page
1 of 1
Recent ...
Replies
Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs
by
Guangchuang Yu
★ 1.2k
an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.
Comment: Trying to use enrichGO
by
Guido Hooiveld
★ 3.9k
Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…
Comment: Different Shrunk Log2FC according with reference
by
andrebolerbarros
▴ 20
Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
ATpoint
★ 4.0k
The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…
Answer: Different Shrunk Log2FC according with reference
by
ATpoint
★ 4.0k
Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…
Votes
C: SGSeq: moving toward diffex from SGSeq analysis
DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds
Subset DEXSeqDataSet In DEXSeq
How to get all possible comparisons in DiffBind
Comment: get BM error
Awards
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Scholar
to
ATpoint
★ 4.0k
Popular Question
to
Gordon Smyth
50k
Popular Question
to
i.sudbery
▴ 40
Scholar
to
Michael Love
41k
Popular Question
to
shepherl
3.8k
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