Showing : SystemsBiology • reset
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
Bioconductor Network RNASeqData SystemsBiology
9 months ago info ▴ 10
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Is there any description available for KEGG Pathway Edge Types
KEGG SystemsBiology KEGGgraph ontology
18 months ago Wuschel ▴ 10
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Job: Postdoctoral Researcher in the Computational Systems Pharmacology Research Group at University of Turku, Finland
systemsbiology network analysis drugvsdisease Job
7.9 years ago jing.tang • 0
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Job: Senior Postdoctoral Fellow in Computational Biology/Bioinformatics : Adelaide, Australia
postdoc bioinformatics network analysis australia systemsbiology Job
8.0 years ago david.lynn • 0
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Job: Postdoctoral Research Fellow in Bioinformatics – Systems Biology of Childhood Cancer
bioinformatics systemsbiology cancer job austria Job
8.8 years ago • updated 8.7 years ago heinrich.kovar ▴ 10
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Job: Postdoctoral Research Fellow in Bioinformatics - Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Mainz, Germany
bioinformatician job rnaseq statistics systemsbiology Job
9.0 years ago Federico Marini ▴ 150
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Job: Post-Doctoral Research Fellow - Patient Genomics Data Visualization
visualization genomics personalized medicine systemsbiology js Job
9.0 years ago Hamid Bolouri ▴ 50
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Job: Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
job computational biology genomics cancer systemsbiology Job
9.4 years ago Shamith.Samarajiwa ▴ 180
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Job: Faculty Position in Computational Systems Biology at UC Riverside
systemsbiology bioinformatics position Job
9.5 years ago Thomas Girke ★ 1.7k
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RCytoscape: tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small
SystemsBiology Network RCytoscape SystemsBiology Network RCytoscape
10.3 years ago Paul Shannon ▴ 750
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Adding Illumina GEO GPL IDs to IlluminaIDMapping?
SystemsBiology lumi SystemsBiology lumi
updated 13.2 years ago by 21k • written 13.2 years ago by ★ 1.2k
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SPIA, hacked to run with only selected pathways
SystemsBiology Pathways Cancer SPIA SystemsBiology Pathways Cancer SPIA
14.4 years ago Tarca, Adi ▴ 570
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Median-Interquartile Normalization
Microarray SystemsBiology Annotation GO Preprocessing Clustering Cancer Yeast Organism GO
16.5 years ago McGee, Monnie ▴ 300
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slow graph methods
SystemsBiology graph SystemsBiology graph
updated 16.6 years ago by ★ 7.4k • written 16.6 years ago by 25k
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biomaRt -> XML::addNode masks graph
SystemsBiology Cancer graph biomaRt SystemsBiology Cancer graph biomaRt
16.6 years ago Seth Falcon ★ 7.4k
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limma question: direct two-color design & modeling individual subject effects
SystemsBiology Regression probe limma SystemsBiology Regression probe limma
updated 17.0 years ago by ★ 1.1k • written 17.0 years ago by 50k
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RBGL, shortest paths, edge weights, and the new graph class
SystemsBiology graph RBGL SystemsBiology graph RBGL
17.9 years ago Seth Falcon ★ 7.4k
17 results • Page 1 of 1
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Comment: Differential peaks that were not identified in diffbind were identified in diseq by ATpoint ★ 4.0k
As expected normalization is **way** off, meaning in simple terms that the cloud is too high. The deep-blue area should be along y=0. Try t…
Comment: Differential peaks that were not identified in diffbind were identified in diseq by lonn • 0
Thank you for your suggestions! Here is the MA plot: ![enter image description here][1] I tried several normalization methods with DiffBi…
Answer: OrgDb for maize by Guido Hooiveld ★ 3.9k
I notice the data you are working with is based on `ensembl` ids. This is important, because the `OrgDb` are annotation databases that are …
Comment: Theoretical WGCNA Question by Garrett • 0
Thanks Peter!
Comment: FGSEA pre-ranked input in increasing order or decreasing by sropri • 0
Thank you!
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Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
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