11 months ago • updated 10 months ago
Habil Zare
▴
200
4
votes
8
replies
1.1k
views
0
votes
4
replies
960
views
updated 8 weeks ago by
Marcel Ramos
690
•
written 24 months ago by
Emre
•
0
0
votes
4
replies
258
views
updated 9 weeks ago by
Lluís Revilla Sancho
▴
730
•
written 9 weeks ago by
tirordep
•
0
1
vote
3
replies
3.0k
views
updated 4 weeks ago by
snijesh
▴
20
•
written 6.5 years ago by
Ramiro Magno
▴
100
0
votes
2
replies
834
views
12 months ago • updated 11 months ago
qiz218591
•
0
0
votes
1
reply
370
views
5 months ago
leon
•
0
0
votes
1
reply
206
views
written 5 weeks ago by
BioinfoMug
•
0
0
votes
1
reply
600
views
0
votes
0
replies
132
views
6 weeks ago • updated 4 weeks ago
Giovanni Calice
▴
160
1
vote
0
replies
143
views
0
votes
0
replies
139
views
11 weeks ago
Thalita
•
0
0
votes
0
replies
239
views
0
votes
0
replies
138
views
9 weeks ago
jain72744
•
0
Recent ...
Replies
Answer: OrgDb for maize
by
James W. MacDonald
65k
```
> library(AnnotationHub)
> hub <- AnnotationHub()
|===========================| 100%
snapshotDate(): 2023-10-23
> query(hu…
Comment: Which input file is used for DGEList in EgdeR?
by
i.atanasoai
•
0
Understood, Thank you very much for the reply, very kind.
Comment: Which input file is used for DGEList in EgdeR?
by
Michael Love
41k
"gene_counts_length_scaled.tsv file generated by the nf-core be exactly that?"
No that is the counts scaled by the length. Counts + offset…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa
by
Michael Love
41k
These genes are fine. They are just the ones where, by chance, the sample variance is below the sample mean. It happens. DESeq2 brings thes…
Comment: DEG with low counts
by
Michael Love
41k
These counts are too low, only a few samples above a count of 10. So for typical RNA-seq data that is underpowered to call differences.
It…
Votes
Awards
• All
Popular Question to
shepherl
3.8k
Popular Question to
BioinfGuru
▴
30
Popular Question to
Gordon Smyth
50k
Scholar to
Peter Hickey
▴
740
Popular Question to
sropri
•
0
Locations
• All
Netherlands, 5 minutes ago
France, 8 minutes ago
United States, 12 minutes ago
Ireland, 15 minutes ago
Sweden, 21 minutes ago
Netherlands, 5 minutes ago
France, 8 minutes ago
United States, 12 minutes ago
Ireland, 15 minutes ago
Sweden, 21 minutes ago
Traffic: 873 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6