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Answer: Joining different datasets and analyzing using the group-specific condition effe
by
Michael Love
39k
Yes, this sounds reasonable and will estimate a fixed batch/dataset effect and help you estimate a fixed condition effect. If you wanted to…
Comment: Adding gene names to DESeq result
by
artem.vorobyev
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0
Hi, if it doesn't have to be GenomicFeature package, then there are plenty of other options. I'm usually using biomaRt R package.
```
res<…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
39k
We have a part of the bootRanges vignette where we assess the distance between subsequent ranges. Importantly, this is done per iteration, …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
Hello Dr. Michael,
I did the analysis with withinChrom=FALSE
How do you calculate inter range or inter feature distance? how do you take…
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