Bioconductor TFBSTools

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error TFBSTools R

4.4 years ago • updated 4.3 years ago HELEN • 0

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tfbstools jaspar

updated 10.4 years ago by Ge Tan ▴ 20 • written 10.4 years ago by JasonLouisStein • 0

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bioconductor tfbstools

updated 9.4 years ago by Ge Tan ▴ 20 • written 9.4 years ago by laurabuggiotti • 0

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TFBSTools looping PFMatrixList PFMatrix bioconductor

8.8 years ago nathan.lawlor03 • 0

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pwm tfbstools jaspar

updated 8.4 years ago by Ge Tan ▴ 20 • written 8.5 years ago by chrisclarkson100 ▴ 50

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TFBSTools R forloop

updated 4.3 years ago by onlineclasshelpnow • 0 • written 4.3 years ago by HELEN • 0

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tfbstools

updated 10.8 years ago by Ge Tan ▴ 20 • written 10.9 years ago by franceskrussell • 0

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TFBSTools DNASeqData readFASTA DNA RStudio

updated 4.3 years ago by James W. MacDonald 68k • written 4.3 years ago by HELEN • 0

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TFBSTools FASTA RStudio

4.3 years ago HELEN • 0

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TFBSTools RStudio R

4.4 years ago HELEN • 0

10 results • Page 1 of 1

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Comment: GSEA error by Adithi • 0

Thank you so much. That makes perfect sense to me. I will work on this.

Comment: tximeta cannot open annotation gtf? by Michael Love 43k

Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…

Answer: tximeta cannot open annotation gtf? by ATpoint ★ 5.0k

> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…

Answer: GSEA error by James W. MacDonald 68k

At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Votes

Answer: GSEA error

Answer: OrgDb for maize

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

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