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Bioconductor Carpentries instructor training
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Maria Doyle
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Job:
Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
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20 months ago
Andy Lynch
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Research software engineer at the de Duve Institute, UCLouvain (Brussels, Belgium)
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5.4 years ago
Laurent Gatto
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EdgeR: Explaning dispersion types to newbies
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updated 5.8 years ago by
Aaron Lun
★ 28k • written 5.8 years ago by
Mr.RB
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News:
New Master of Science in Quantitative and Computational Biology at University of Trento, Italy
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updated 7.7 years ago by
Chloe2013025
• 0 • written 7.8 years ago by
enridomenici
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Bioconductor-related papers -- special F1000Research collection for Bioc2016
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updated 8.0 years ago by
thomas.ingraham
▴ 10 • written 8.0 years ago by
Wolfgang Huber
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Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
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This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
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It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
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A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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