Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Time-course
•
reset
2
votes
8
replies
2.4k
views
Limma for differential expression in a time-course
limma
multiple time points
time-course
differential expression
updated 6.5 years ago by
Aaron Lun
★ 28k • written 6.5 years ago by
Jake
• 0
1
vote
7
replies
1.9k
views
Visualization for Time Course "LRT" test in DESeq2
deseq2
time-course
updated 5.8 years ago by
Michael Love
41k • written 5.8 years ago by
rbenel
▴ 40
1
vote
3
replies
1.9k
views
[DESeq2] time-course Experimental design
rnaseq
deseq2
time-course
updated 6.7 years ago by
Gavin Kelly
▴ 680 • written 6.7 years ago by
inzirio
▴ 10
2
votes
3
replies
1.4k
views
Three-factor design with DESeq2
deseq2
Time-course
updated 4.9 years ago by
Michael Love
41k • written 4.9 years ago by
h.valipour.k
• 0
1
vote
2
replies
756
views
Time-series analysis with control and treated samples, and Fold Change extraction in DESeq2
deseq2
time-serie
time-course
fold-change
updated 3.9 years ago by
swbarnes2
★ 1.3k • written 3.9 years ago by
Victor Chano
• 0
0
votes
1
reply
541
views
Input of tscR
microarray
normalization
tscR
time-course
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
keremwai
• 0
0
votes
1
reply
619
views
DESeq2 analysis of multifactorial RNAseq experiment
deseq2
design
time-course
updated 4.8 years ago by
Michael Love
41k • written 4.8 years ago by
Victor Chano
• 0
0
votes
0
replies
905
views
How to specify covariates in maSigPro analysis (like limma)
masigpro
covariates
limma
differential expression
time-course
6.5 years ago
veersingh.marwah
• 0
8 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
Awards
• All
Popular Question
to
Pierre Lindenbaum
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Jenny Drnevich
★ 2.0k
Popular Question
to
Robert Castelo
★ 3.1k
Teacher
to
Peter Langfelder
★ 2.9k
Locations
• All
France,
2 minutes ago
United States,
6 minutes ago
UPF, Barcelona, Spain,
14 minutes ago
United States,
18 minutes ago
Estonia,
26 minutes ago
Traffic: 808 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6